Gene : Cagra.7524s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  1
Name:  ? Cagra.7524s0001 Secondary Identifier:  ? PAC:28899294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7524s0001 0.5kb upstream 0.5kb upstream 3526 true Scaffold7524: 5503-9028 Capsella grandiflora
Cagra.7524s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7524: 8529-9028 Capsella grandiflora
Cagra.7524s0001 0.5kb downstream 0.5kb downstream 3526 true Scaffold7524: 5003-8528 Capsella grandiflora
Cagra.7524s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7524: 5003-5502 Capsella grandiflora
Cagra.7524s0001 1.0kb upstream 1.0kb upstream 4026 true Scaffold7524: 5503-9528 Capsella grandiflora
Cagra.7524s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold7524: 8529-9528 Capsella grandiflora
Cagra.7524s0001 1.0kb downstream 1.0kb downstream 4026 true Scaffold7524: 4503-8528 Capsella grandiflora
Cagra.7524s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7524: 4503-5502 Capsella grandiflora
Cagra.7524s0001 2.0kb upstream 2.0kb upstream 5026 true Scaffold7524: 5503-10528 Capsella grandiflora
Cagra.7524s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold7524: 8529-10528 Capsella grandiflora
Cagra.7524s0001 2.0kb downstream 2.0kb downstream 5026 true Scaffold7524: 3503-8528 Capsella grandiflora
Cagra.7524s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7524: 3503-5502 Capsella grandiflora
Cagra.7524s0001 5.0kb upstream 5.0kb upstream 8026 true Scaffold7524: 5503-13528 Capsella grandiflora
Cagra.7524s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold7524: 8529-13528 Capsella grandiflora
Cagra.7524s0001 5.0kb downstream 5.0kb downstream 8026 true Scaffold7524: 503-8528 Capsella grandiflora
Cagra.7524s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold7524: 503-5502 Capsella grandiflora
Cagra.7524s0001 10.0kb upstream 10.0kb upstream 13026 true Scaffold7524: 5503-18528 Capsella grandiflora
Cagra.7524s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold7524: 8529-18528 Capsella grandiflora
Cagra.7524s0001 10.0kb downstream 10.0kb downstream 8528 true Scaffold7524: 1-8528 Capsella grandiflora
Cagra.7524s0001 10.0kb downstream 10.0kb downstream 5502 false Scaffold7524: 1-5502 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364678 5261 Brassicaceae View MSA
123841434 5264 Brassicales-Malvales View MSA
124345663 5266 SBM View MSA
124248525 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain