Gene : Cagra.7526s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  19
Name:  ? Cagra.7526s0019 Secondary Identifier:  ? PAC:28911248
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7526s0019 0.5kb upstream 0.5kb upstream 4712 true Scaffold7526: 74819-79530 Capsella grandiflora
Cagra.7526s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold7526: 79031-79530 Capsella grandiflora
Cagra.7526s0019 0.5kb downstream 0.5kb downstream 4712 true Scaffold7526: 74319-79030 Capsella grandiflora
Cagra.7526s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold7526: 74319-74818 Capsella grandiflora
Cagra.7526s0019 1.0kb upstream 1.0kb upstream 5212 true Scaffold7526: 74819-80030 Capsella grandiflora
Cagra.7526s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold7526: 79031-80030 Capsella grandiflora
Cagra.7526s0019 1.0kb downstream 1.0kb downstream 5212 true Scaffold7526: 73819-79030 Capsella grandiflora
Cagra.7526s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold7526: 73819-74818 Capsella grandiflora
Cagra.7526s0019 2.0kb upstream 2.0kb upstream 6212 true Scaffold7526: 74819-81030 Capsella grandiflora
Cagra.7526s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold7526: 79031-81030 Capsella grandiflora
Cagra.7526s0019 2.0kb downstream 2.0kb downstream 6212 true Scaffold7526: 72819-79030 Capsella grandiflora
Cagra.7526s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold7526: 72819-74818 Capsella grandiflora
Cagra.7526s0019 5.0kb upstream 5.0kb upstream 9212 true Scaffold7526: 74819-84030 Capsella grandiflora
Cagra.7526s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold7526: 79031-84030 Capsella grandiflora
Cagra.7526s0019 5.0kb downstream 5.0kb downstream 9212 true Scaffold7526: 69819-79030 Capsella grandiflora
Cagra.7526s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold7526: 69819-74818 Capsella grandiflora
Cagra.7526s0019 10.0kb upstream 10.0kb upstream 14212 true Scaffold7526: 74819-89030 Capsella grandiflora
Cagra.7526s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold7526: 79031-89030 Capsella grandiflora
Cagra.7526s0019 10.0kb downstream 10.0kb downstream 14212 true Scaffold7526: 64819-79030 Capsella grandiflora
Cagra.7526s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold7526: 64819-74818 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367869 5261 Brassicaceae View MSA
123836418 5264 Brassicales-Malvales View MSA
124338753 5266 SBM View MSA
124242719 5268 Malvidae View MSA
124066048 5270 Rosid View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain