Gene : Cagra.7717s0002 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31707:SF13 - PECTINESTERASE/PECTINESTERASE INHIBITOR 21-RELATED Genomic Order:  2
Name:  ? Cagra.7717s0002 Secondary Identifier:  ? PAC:28904016
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7717s0002 0.5kb upstream 0.5kb upstream 2696 true Scaffold7717: 4015-6710 Capsella grandiflora
Cagra.7717s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7717: 6211-6710 Capsella grandiflora
Cagra.7717s0002 0.5kb downstream 0.5kb downstream 2696 true Scaffold7717: 3515-6210 Capsella grandiflora
Cagra.7717s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7717: 3515-4014 Capsella grandiflora
Cagra.7717s0002 1.0kb upstream 1.0kb upstream 3196 true Scaffold7717: 4015-7210 Capsella grandiflora
Cagra.7717s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7717: 6211-7210 Capsella grandiflora
Cagra.7717s0002 1.0kb downstream 1.0kb downstream 3196 true Scaffold7717: 3015-6210 Capsella grandiflora
Cagra.7717s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7717: 3015-4014 Capsella grandiflora
Cagra.7717s0002 2.0kb upstream 2.0kb upstream 4196 true Scaffold7717: 4015-8210 Capsella grandiflora
Cagra.7717s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7717: 6211-8210 Capsella grandiflora
Cagra.7717s0002 2.0kb downstream 2.0kb downstream 4196 true Scaffold7717: 2015-6210 Capsella grandiflora
Cagra.7717s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7717: 2015-4014 Capsella grandiflora
Cagra.7717s0002 5.0kb upstream 5.0kb upstream 7196 true Scaffold7717: 4015-11210 Capsella grandiflora
Cagra.7717s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7717: 6211-11210 Capsella grandiflora
Cagra.7717s0002 5.0kb downstream 5.0kb downstream 6210 true Scaffold7717: 1-6210 Capsella grandiflora
Cagra.7717s0002 5.0kb downstream 5.0kb downstream 4014 false Scaffold7717: 1-4014 Capsella grandiflora
Cagra.7717s0002 10.0kb upstream 10.0kb upstream 12196 true Scaffold7717: 4015-16210 Capsella grandiflora
Cagra.7717s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold7717: 6211-16210 Capsella grandiflora
Cagra.7717s0002 10.0kb downstream 10.0kb downstream 6210 true Scaffold7717: 1-6210 Capsella grandiflora
Cagra.7717s0002 10.0kb downstream 10.0kb downstream 4014 false Scaffold7717: 1-4014 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365369 5261 Brassicaceae View MSA
123840524 5264 Brassicales-Malvales View MSA
124341579 5266 SBM View MSA
124251483 5268 Malvidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain