Gene : Cagra.12428s0012 C. grandiflora v1.1
Defline:  (1 of 48) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  12
Name:  ? Cagra.12428s0012 Secondary Identifier:  ? PAC:28910211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12428s0012 0.5kb upstream 0.5kb upstream 2354 true Scaffold12428: 45502-47855 Capsella grandiflora
Cagra.12428s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold12428: 45502-46001 Capsella grandiflora
Cagra.12428s0012 0.5kb downstream 0.5kb downstream 2354 true Scaffold12428: 46002-48355 Capsella grandiflora
Cagra.12428s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold12428: 47856-48355 Capsella grandiflora
Cagra.12428s0012 1.0kb upstream 1.0kb upstream 2854 true Scaffold12428: 45002-47855 Capsella grandiflora
Cagra.12428s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold12428: 45002-46001 Capsella grandiflora
Cagra.12428s0012 1.0kb downstream 1.0kb downstream 2854 true Scaffold12428: 46002-48855 Capsella grandiflora
Cagra.12428s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold12428: 47856-48855 Capsella grandiflora
Cagra.12428s0012 2.0kb upstream 2.0kb upstream 3854 true Scaffold12428: 44002-47855 Capsella grandiflora
Cagra.12428s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold12428: 44002-46001 Capsella grandiflora
Cagra.12428s0012 2.0kb downstream 2.0kb downstream 3854 true Scaffold12428: 46002-49855 Capsella grandiflora
Cagra.12428s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold12428: 47856-49855 Capsella grandiflora
Cagra.12428s0012 5.0kb upstream 5.0kb upstream 6854 true Scaffold12428: 41002-47855 Capsella grandiflora
Cagra.12428s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold12428: 41002-46001 Capsella grandiflora
Cagra.12428s0012 5.0kb downstream 5.0kb downstream 6854 true Scaffold12428: 46002-52855 Capsella grandiflora
Cagra.12428s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold12428: 47856-52855 Capsella grandiflora
Cagra.12428s0012 10.0kb upstream 10.0kb upstream 11854 true Scaffold12428: 36002-47855 Capsella grandiflora
Cagra.12428s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold12428: 36002-46001 Capsella grandiflora
Cagra.12428s0012 10.0kb downstream 10.0kb downstream 11854 true Scaffold12428: 46002-57855 Capsella grandiflora
Cagra.12428s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold12428: 47856-57855 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365448 5261 Brassicaceae View MSA
123798957 5264 Brassicales-Malvales View MSA
124296529 5266 SBM View MSA
124252619 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain