Gene : Cagra.12458s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11361:SF14 - DNA MISMATCH REPAIR PROTEIN MUTS2 Genomic Order:  1
Name:  ? Cagra.12458s0001 Secondary Identifier:  ? PAC:28916652
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12458s0001 0.5kb upstream 0.5kb upstream 3899 true Scaffold12458: 1-3899 Capsella grandiflora
Cagra.12458s0001 0.5kb upstream 0.5kb upstream 15 false Scaffold12458: 1-15 Capsella grandiflora
Cagra.12458s0001 0.5kb downstream 0.5kb downstream 4284 true Scaffold12458: 16-4299 Capsella grandiflora
Cagra.12458s0001 0.5kb downstream 0.5kb downstream 400 false Scaffold12458: 3900-4299 Capsella grandiflora
Cagra.12458s0001 1.0kb upstream 1.0kb upstream 3899 true Scaffold12458: 1-3899 Capsella grandiflora
Cagra.12458s0001 1.0kb upstream 1.0kb upstream 15 false Scaffold12458: 1-15 Capsella grandiflora
Cagra.12458s0001 1.0kb downstream 1.0kb downstream 4284 true Scaffold12458: 16-4299 Capsella grandiflora
Cagra.12458s0001 1.0kb downstream 1.0kb downstream 400 false Scaffold12458: 3900-4299 Capsella grandiflora
Cagra.12458s0001 2.0kb upstream 2.0kb upstream 3899 true Scaffold12458: 1-3899 Capsella grandiflora
Cagra.12458s0001 2.0kb upstream 2.0kb upstream 15 false Scaffold12458: 1-15 Capsella grandiflora
Cagra.12458s0001 2.0kb downstream 2.0kb downstream 4284 true Scaffold12458: 16-4299 Capsella grandiflora
Cagra.12458s0001 2.0kb downstream 2.0kb downstream 400 false Scaffold12458: 3900-4299 Capsella grandiflora
Cagra.12458s0001 5.0kb upstream 5.0kb upstream 3899 true Scaffold12458: 1-3899 Capsella grandiflora
Cagra.12458s0001 5.0kb upstream 5.0kb upstream 15 false Scaffold12458: 1-15 Capsella grandiflora
Cagra.12458s0001 5.0kb downstream 5.0kb downstream 4284 true Scaffold12458: 16-4299 Capsella grandiflora
Cagra.12458s0001 5.0kb downstream 5.0kb downstream 400 false Scaffold12458: 3900-4299 Capsella grandiflora
Cagra.12458s0001 10.0kb upstream 10.0kb upstream 3899 true Scaffold12458: 1-3899 Capsella grandiflora
Cagra.12458s0001 10.0kb upstream 10.0kb upstream 15 false Scaffold12458: 1-15 Capsella grandiflora
Cagra.12458s0001 10.0kb downstream 10.0kb downstream 4284 true Scaffold12458: 16-4299 Capsella grandiflora
Cagra.12458s0001 10.0kb downstream 10.0kb downstream 400 false Scaffold12458: 3900-4299 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360294 5261 Brassicaceae View MSA
123827649 5264 Brassicales-Malvales View MSA
124340405 5266 SBM View MSA
124239742 5268 Malvidae View MSA
124073530 5270 Rosid View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain