Gene : Cagra.12562s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31945:SF17 - TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  2
Name:  ? Cagra.12562s0002 Secondary Identifier:  ? PAC:28895550
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12562s0002 0.5kb upstream 0.5kb upstream 1918 true Scaffold12562: 7002-8919 Capsella grandiflora
Cagra.12562s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12562: 7002-7501 Capsella grandiflora
Cagra.12562s0002 0.5kb downstream 0.5kb downstream 1918 true Scaffold12562: 7502-9419 Capsella grandiflora
Cagra.12562s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12562: 8920-9419 Capsella grandiflora
Cagra.12562s0002 1.0kb upstream 1.0kb upstream 2418 true Scaffold12562: 6502-8919 Capsella grandiflora
Cagra.12562s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12562: 6502-7501 Capsella grandiflora
Cagra.12562s0002 1.0kb downstream 1.0kb downstream 2418 true Scaffold12562: 7502-9919 Capsella grandiflora
Cagra.12562s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12562: 8920-9919 Capsella grandiflora
Cagra.12562s0002 2.0kb upstream 2.0kb upstream 3418 true Scaffold12562: 5502-8919 Capsella grandiflora
Cagra.12562s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12562: 5502-7501 Capsella grandiflora
Cagra.12562s0002 2.0kb downstream 2.0kb downstream 3418 true Scaffold12562: 7502-10919 Capsella grandiflora
Cagra.12562s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12562: 8920-10919 Capsella grandiflora
Cagra.12562s0002 5.0kb upstream 5.0kb upstream 6418 true Scaffold12562: 2502-8919 Capsella grandiflora
Cagra.12562s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12562: 2502-7501 Capsella grandiflora
Cagra.12562s0002 5.0kb downstream 5.0kb downstream 6418 true Scaffold12562: 7502-13919 Capsella grandiflora
Cagra.12562s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12562: 8920-13919 Capsella grandiflora
Cagra.12562s0002 10.0kb upstream 10.0kb upstream 8919 true Scaffold12562: 1-8919 Capsella grandiflora
Cagra.12562s0002 10.0kb upstream 10.0kb upstream 7501 false Scaffold12562: 1-7501 Capsella grandiflora
Cagra.12562s0002 10.0kb downstream 10.0kb downstream 11418 true Scaffold12562: 7502-18919 Capsella grandiflora
Cagra.12562s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold12562: 8920-18919 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372512 5261 Brassicaceae View MSA
123828087 5264 Brassicales-Malvales View MSA
124344117 5266 SBM View MSA
124250842 5268 Malvidae View MSA
124063939 5270 Rosid View MSA
123751108 5271 Pentapetalae View MSA
122786692 5272 Eudicot View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain