Gene : Cagra.12571s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23056:SF45 - CALCINEURIN B-LIKE PROTEIN 4 Genomic Order:  1
Name:  ? Cagra.12571s0001 Secondary Identifier:  ? PAC:28911669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12571s0001 0.5kb upstream 0.5kb upstream 1039 true Scaffold12571: 200-1238 Capsella grandiflora
Cagra.12571s0001 0.5kb upstream 0.5kb upstream 29 false Scaffold12571: 1210-1238 Capsella grandiflora
Cagra.12571s0001 0.5kb downstream 0.5kb downstream 1209 true Scaffold12571: 1-1209 Capsella grandiflora
Cagra.12571s0001 0.5kb downstream 0.5kb downstream 199 false Scaffold12571: 1-199 Capsella grandiflora
Cagra.12571s0001 1.0kb upstream 1.0kb upstream 1039 true Scaffold12571: 200-1238 Capsella grandiflora
Cagra.12571s0001 1.0kb upstream 1.0kb upstream 29 false Scaffold12571: 1210-1238 Capsella grandiflora
Cagra.12571s0001 1.0kb downstream 1.0kb downstream 1209 true Scaffold12571: 1-1209 Capsella grandiflora
Cagra.12571s0001 1.0kb downstream 1.0kb downstream 199 false Scaffold12571: 1-199 Capsella grandiflora
Cagra.12571s0001 2.0kb upstream 2.0kb upstream 1039 true Scaffold12571: 200-1238 Capsella grandiflora
Cagra.12571s0001 2.0kb upstream 2.0kb upstream 29 false Scaffold12571: 1210-1238 Capsella grandiflora
Cagra.12571s0001 2.0kb downstream 2.0kb downstream 1209 true Scaffold12571: 1-1209 Capsella grandiflora
Cagra.12571s0001 2.0kb downstream 2.0kb downstream 199 false Scaffold12571: 1-199 Capsella grandiflora
Cagra.12571s0001 5.0kb upstream 5.0kb upstream 1039 true Scaffold12571: 200-1238 Capsella grandiflora
Cagra.12571s0001 5.0kb upstream 5.0kb upstream 29 false Scaffold12571: 1210-1238 Capsella grandiflora
Cagra.12571s0001 5.0kb downstream 5.0kb downstream 1209 true Scaffold12571: 1-1209 Capsella grandiflora
Cagra.12571s0001 5.0kb downstream 5.0kb downstream 199 false Scaffold12571: 1-199 Capsella grandiflora
Cagra.12571s0001 10.0kb upstream 10.0kb upstream 1039 true Scaffold12571: 200-1238 Capsella grandiflora
Cagra.12571s0001 10.0kb upstream 10.0kb upstream 29 false Scaffold12571: 1210-1238 Capsella grandiflora
Cagra.12571s0001 10.0kb downstream 10.0kb downstream 1209 true Scaffold12571: 1-1209 Capsella grandiflora
Cagra.12571s0001 10.0kb downstream 10.0kb downstream 199 false Scaffold12571: 1-199 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332452 5261 Brassicaceae Singleton cluster - no MSA
123773520 5264 Brassicales-Malvales Singleton cluster - no MSA
124272000 5266 SBM Singleton cluster - no MSA
124255486 5268 Malvidae View MSA
124069331 5270 Rosid View MSA
123753590 5271 Pentapetalae View MSA
122775160 5272 Eudicot View MSA
122051597 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain