Gene : Cagra.12787s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13421:SF16 - SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3 Genomic Order:  1
Name:  ? Cagra.12787s0001 Secondary Identifier:  ? PAC:28896571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12787s0001 0.5kb upstream 0.5kb upstream 1275 true Scaffold12787: 1-1275 Capsella grandiflora
Cagra.12787s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold12787: 1-1 Capsella grandiflora
Cagra.12787s0001 0.5kb downstream 0.5kb downstream 1275 true Scaffold12787: 2-1276 Capsella grandiflora
Cagra.12787s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold12787: 1276-1276 Capsella grandiflora
Cagra.12787s0001 1.0kb upstream 1.0kb upstream 1275 true Scaffold12787: 1-1275 Capsella grandiflora
Cagra.12787s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold12787: 1-1 Capsella grandiflora
Cagra.12787s0001 1.0kb downstream 1.0kb downstream 1275 true Scaffold12787: 2-1276 Capsella grandiflora
Cagra.12787s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold12787: 1276-1276 Capsella grandiflora
Cagra.12787s0001 2.0kb upstream 2.0kb upstream 1275 true Scaffold12787: 1-1275 Capsella grandiflora
Cagra.12787s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold12787: 1-1 Capsella grandiflora
Cagra.12787s0001 2.0kb downstream 2.0kb downstream 1275 true Scaffold12787: 2-1276 Capsella grandiflora
Cagra.12787s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold12787: 1276-1276 Capsella grandiflora
Cagra.12787s0001 5.0kb upstream 5.0kb upstream 1275 true Scaffold12787: 1-1275 Capsella grandiflora
Cagra.12787s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold12787: 1-1 Capsella grandiflora
Cagra.12787s0001 5.0kb downstream 5.0kb downstream 1275 true Scaffold12787: 2-1276 Capsella grandiflora
Cagra.12787s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold12787: 1276-1276 Capsella grandiflora
Cagra.12787s0001 10.0kb upstream 10.0kb upstream 1275 true Scaffold12787: 1-1275 Capsella grandiflora
Cagra.12787s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold12787: 1-1 Capsella grandiflora
Cagra.12787s0001 10.0kb downstream 10.0kb downstream 1275 true Scaffold12787: 2-1276 Capsella grandiflora
Cagra.12787s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold12787: 1276-1276 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343888 5261 Brassicaceae View MSA
123783976 5264 Brassicales-Malvales View MSA
124282179 5266 SBM View MSA
124249936 5268 Malvidae View MSA
124069260 5270 Rosid View MSA
123750500 5271 Pentapetalae View MSA
122795479 5272 Eudicot View MSA
122043985 5273 Angiosperm View MSA
121347836 5274 Embryophyte View MSA
123424819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain