Gene : Cagra.12752s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21237:SF4 - GRPE PROTEIN HOMOLOG Genomic Order:  1
Name:  ? Cagra.12752s0001 Secondary Identifier:  ? PAC:28896615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12752s0001 0.5kb upstream 0.5kb upstream 2268 true Scaffold12752: 3057-5324 Capsella grandiflora
Cagra.12752s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12752: 3057-3556 Capsella grandiflora
Cagra.12752s0001 0.5kb downstream 0.5kb downstream 2268 true Scaffold12752: 3557-5824 Capsella grandiflora
Cagra.12752s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12752: 5325-5824 Capsella grandiflora
Cagra.12752s0001 1.0kb upstream 1.0kb upstream 2768 true Scaffold12752: 2557-5324 Capsella grandiflora
Cagra.12752s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12752: 2557-3556 Capsella grandiflora
Cagra.12752s0001 1.0kb downstream 1.0kb downstream 2768 true Scaffold12752: 3557-6324 Capsella grandiflora
Cagra.12752s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12752: 5325-6324 Capsella grandiflora
Cagra.12752s0001 2.0kb upstream 2.0kb upstream 3768 true Scaffold12752: 1557-5324 Capsella grandiflora
Cagra.12752s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12752: 1557-3556 Capsella grandiflora
Cagra.12752s0001 2.0kb downstream 2.0kb downstream 3768 true Scaffold12752: 3557-7324 Capsella grandiflora
Cagra.12752s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12752: 5325-7324 Capsella grandiflora
Cagra.12752s0001 5.0kb upstream 5.0kb upstream 5324 true Scaffold12752: 1-5324 Capsella grandiflora
Cagra.12752s0001 5.0kb upstream 5.0kb upstream 3556 false Scaffold12752: 1-3556 Capsella grandiflora
Cagra.12752s0001 5.0kb downstream 5.0kb downstream 6768 true Scaffold12752: 3557-10324 Capsella grandiflora
Cagra.12752s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12752: 5325-10324 Capsella grandiflora
Cagra.12752s0001 10.0kb upstream 10.0kb upstream 5324 true Scaffold12752: 1-5324 Capsella grandiflora
Cagra.12752s0001 10.0kb upstream 10.0kb upstream 3556 false Scaffold12752: 1-3556 Capsella grandiflora
Cagra.12752s0001 10.0kb downstream 10.0kb downstream 8896 true Scaffold12752: 3557-12452 Capsella grandiflora
Cagra.12752s0001 10.0kb downstream 10.0kb downstream 7128 false Scaffold12752: 5325-12452 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370761 5261 Brassicaceae View MSA
123834756 5264 Brassicales-Malvales View MSA
124343188 5266 SBM View MSA
124247920 5268 Malvidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain