Gene : Cagra.12924s0002 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2
Name:  ? Cagra.12924s0002 Secondary Identifier:  ? PAC:28905431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12924s0002 0.5kb upstream 0.5kb upstream 4899 true Scaffold12924: 1391-6289 Capsella grandiflora
Cagra.12924s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12924: 1391-1890 Capsella grandiflora
Cagra.12924s0002 0.5kb downstream 0.5kb downstream 4899 true Scaffold12924: 1891-6789 Capsella grandiflora
Cagra.12924s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12924: 6290-6789 Capsella grandiflora
Cagra.12924s0002 1.0kb upstream 1.0kb upstream 5399 true Scaffold12924: 891-6289 Capsella grandiflora
Cagra.12924s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12924: 891-1890 Capsella grandiflora
Cagra.12924s0002 1.0kb downstream 1.0kb downstream 5399 true Scaffold12924: 1891-7289 Capsella grandiflora
Cagra.12924s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12924: 6290-7289 Capsella grandiflora
Cagra.12924s0002 2.0kb upstream 2.0kb upstream 6289 true Scaffold12924: 1-6289 Capsella grandiflora
Cagra.12924s0002 2.0kb upstream 2.0kb upstream 1890 false Scaffold12924: 1-1890 Capsella grandiflora
Cagra.12924s0002 2.0kb downstream 2.0kb downstream 5776 true Scaffold12924: 1891-7666 Capsella grandiflora
Cagra.12924s0002 2.0kb downstream 2.0kb downstream 1377 false Scaffold12924: 6290-7666 Capsella grandiflora
Cagra.12924s0002 5.0kb upstream 5.0kb upstream 6289 true Scaffold12924: 1-6289 Capsella grandiflora
Cagra.12924s0002 5.0kb upstream 5.0kb upstream 1890 false Scaffold12924: 1-1890 Capsella grandiflora
Cagra.12924s0002 5.0kb downstream 5.0kb downstream 5776 true Scaffold12924: 1891-7666 Capsella grandiflora
Cagra.12924s0002 5.0kb downstream 5.0kb downstream 1377 false Scaffold12924: 6290-7666 Capsella grandiflora
Cagra.12924s0002 10.0kb upstream 10.0kb upstream 6289 true Scaffold12924: 1-6289 Capsella grandiflora
Cagra.12924s0002 10.0kb upstream 10.0kb upstream 1890 false Scaffold12924: 1-1890 Capsella grandiflora
Cagra.12924s0002 10.0kb downstream 10.0kb downstream 5776 true Scaffold12924: 1891-7666 Capsella grandiflora
Cagra.12924s0002 10.0kb downstream 10.0kb downstream 1377 false Scaffold12924: 6290-7666 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122382097 5261 Brassicaceae View MSA
123803662 5264 Brassicales-Malvales View MSA
124300750 5266 SBM View MSA
124151863 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain