Gene : Cagra.12963s0004 C. grandiflora v1.1
Defline:  (1 of 71) PTHR32212:SF126 - EMB Genomic Order:  4
Name:  ? Cagra.12963s0004 Secondary Identifier:  ? PAC:28909281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12963s0004 0.5kb upstream 0.5kb upstream 1900 true Scaffold12963: 7906-9805 Capsella grandiflora
Cagra.12963s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold12963: 7906-8405 Capsella grandiflora
Cagra.12963s0004 0.5kb downstream 0.5kb downstream 1900 true Scaffold12963: 8406-10305 Capsella grandiflora
Cagra.12963s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold12963: 9806-10305 Capsella grandiflora
Cagra.12963s0004 1.0kb upstream 1.0kb upstream 2400 true Scaffold12963: 7406-9805 Capsella grandiflora
Cagra.12963s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold12963: 7406-8405 Capsella grandiflora
Cagra.12963s0004 1.0kb downstream 1.0kb downstream 2400 true Scaffold12963: 8406-10805 Capsella grandiflora
Cagra.12963s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold12963: 9806-10805 Capsella grandiflora
Cagra.12963s0004 2.0kb upstream 2.0kb upstream 3400 true Scaffold12963: 6406-9805 Capsella grandiflora
Cagra.12963s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold12963: 6406-8405 Capsella grandiflora
Cagra.12963s0004 2.0kb downstream 2.0kb downstream 3400 true Scaffold12963: 8406-11805 Capsella grandiflora
Cagra.12963s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold12963: 9806-11805 Capsella grandiflora
Cagra.12963s0004 5.0kb upstream 5.0kb upstream 6400 true Scaffold12963: 3406-9805 Capsella grandiflora
Cagra.12963s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold12963: 3406-8405 Capsella grandiflora
Cagra.12963s0004 5.0kb downstream 5.0kb downstream 6400 true Scaffold12963: 8406-14805 Capsella grandiflora
Cagra.12963s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold12963: 9806-14805 Capsella grandiflora
Cagra.12963s0004 10.0kb upstream 10.0kb upstream 9805 true Scaffold12963: 1-9805 Capsella grandiflora
Cagra.12963s0004 10.0kb upstream 10.0kb upstream 8405 false Scaffold12963: 1-8405 Capsella grandiflora
Cagra.12963s0004 10.0kb downstream 10.0kb downstream 11400 true Scaffold12963: 8406-19805 Capsella grandiflora
Cagra.12963s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold12963: 9806-19805 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374880 5261 Brassicaceae View MSA
123800844 5264 Brassicales-Malvales View MSA
124298209 5266 SBM View MSA
124149908 5268 Malvidae View MSA
123875626 5270 Rosid View MSA
123459418 5271 Pentapetalae View MSA
122494809 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain