Gene : Cagra.12117s0008 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.3.67 - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  8
Name:  ? Cagra.12117s0008 Secondary Identifier:  ? PAC:28899623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6368 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12117s0008 0.5kb upstream 0.5kb upstream 2236 true Scaffold12117: 24647-26882 Capsella grandiflora
Cagra.12117s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold12117: 24647-25146 Capsella grandiflora
Cagra.12117s0008 0.5kb downstream 0.5kb downstream 2236 true Scaffold12117: 25147-27382 Capsella grandiflora
Cagra.12117s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold12117: 26883-27382 Capsella grandiflora
Cagra.12117s0008 1.0kb upstream 1.0kb upstream 2736 true Scaffold12117: 24147-26882 Capsella grandiflora
Cagra.12117s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold12117: 24147-25146 Capsella grandiflora
Cagra.12117s0008 1.0kb downstream 1.0kb downstream 2736 true Scaffold12117: 25147-27882 Capsella grandiflora
Cagra.12117s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold12117: 26883-27882 Capsella grandiflora
Cagra.12117s0008 2.0kb upstream 2.0kb upstream 3736 true Scaffold12117: 23147-26882 Capsella grandiflora
Cagra.12117s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold12117: 23147-25146 Capsella grandiflora
Cagra.12117s0008 2.0kb downstream 2.0kb downstream 3736 true Scaffold12117: 25147-28882 Capsella grandiflora
Cagra.12117s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold12117: 26883-28882 Capsella grandiflora
Cagra.12117s0008 5.0kb upstream 5.0kb upstream 6736 true Scaffold12117: 20147-26882 Capsella grandiflora
Cagra.12117s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold12117: 20147-25146 Capsella grandiflora
Cagra.12117s0008 5.0kb downstream 5.0kb downstream 6736 true Scaffold12117: 25147-31882 Capsella grandiflora
Cagra.12117s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold12117: 26883-31882 Capsella grandiflora
Cagra.12117s0008 10.0kb upstream 10.0kb upstream 11736 true Scaffold12117: 15147-26882 Capsella grandiflora
Cagra.12117s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold12117: 15147-25146 Capsella grandiflora
Cagra.12117s0008 10.0kb downstream 10.0kb downstream 10882 true Scaffold12117: 25147-36028 Capsella grandiflora
Cagra.12117s0008 10.0kb downstream 10.0kb downstream 9146 false Scaffold12117: 26883-36028 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375920 5261 Brassicaceae View MSA
123840120 5264 Brassicales-Malvales View MSA
124338365 5266 SBM View MSA
124239105 5268 Malvidae View MSA
124050149 5270 Rosid View MSA
123737073 5271 Pentapetalae View MSA
122787177 5272 Eudicot View MSA
122048056 5273 Angiosperm View MSA
121345998 5274 Embryophyte View MSA
123380306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain