Gene : Cagra.12206s0014 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31042:SF22 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  14
Name:  ? Cagra.12206s0014 Secondary Identifier:  ? PAC:28911965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12206s0014 0.5kb upstream 0.5kb upstream 5347 true Scaffold12206: 57377-62723 Capsella grandiflora
Cagra.12206s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold12206: 62224-62723 Capsella grandiflora
Cagra.12206s0014 0.5kb downstream 0.5kb downstream 5347 true Scaffold12206: 56877-62223 Capsella grandiflora
Cagra.12206s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold12206: 56877-57376 Capsella grandiflora
Cagra.12206s0014 1.0kb upstream 1.0kb upstream 5613 true Scaffold12206: 57377-62989 Capsella grandiflora
Cagra.12206s0014 1.0kb upstream 1.0kb upstream 766 false Scaffold12206: 62224-62989 Capsella grandiflora
Cagra.12206s0014 1.0kb downstream 1.0kb downstream 5847 true Scaffold12206: 56377-62223 Capsella grandiflora
Cagra.12206s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold12206: 56377-57376 Capsella grandiflora
Cagra.12206s0014 2.0kb upstream 2.0kb upstream 5613 true Scaffold12206: 57377-62989 Capsella grandiflora
Cagra.12206s0014 2.0kb upstream 2.0kb upstream 766 false Scaffold12206: 62224-62989 Capsella grandiflora
Cagra.12206s0014 2.0kb downstream 2.0kb downstream 6847 true Scaffold12206: 55377-62223 Capsella grandiflora
Cagra.12206s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold12206: 55377-57376 Capsella grandiflora
Cagra.12206s0014 5.0kb upstream 5.0kb upstream 5613 true Scaffold12206: 57377-62989 Capsella grandiflora
Cagra.12206s0014 5.0kb upstream 5.0kb upstream 766 false Scaffold12206: 62224-62989 Capsella grandiflora
Cagra.12206s0014 5.0kb downstream 5.0kb downstream 9847 true Scaffold12206: 52377-62223 Capsella grandiflora
Cagra.12206s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold12206: 52377-57376 Capsella grandiflora
Cagra.12206s0014 10.0kb upstream 10.0kb upstream 5613 true Scaffold12206: 57377-62989 Capsella grandiflora
Cagra.12206s0014 10.0kb upstream 10.0kb upstream 766 false Scaffold12206: 62224-62989 Capsella grandiflora
Cagra.12206s0014 10.0kb downstream 10.0kb downstream 14847 true Scaffold12206: 47377-62223 Capsella grandiflora
Cagra.12206s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold12206: 47377-57376 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376005 5261 Brassicaceae View MSA
123837962 5264 Brassicales-Malvales View MSA
124337491 5266 SBM View MSA
124242421 5268 Malvidae View MSA
124069313 5270 Rosid View MSA
123745528 5271 Pentapetalae View MSA
122791834 5272 Eudicot View MSA
122045211 5273 Angiosperm View MSA
121345766 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain