Gene : Cagra.12215s0002 C. grandiflora v1.1
Defline:  (1 of 5) PF04937 - Protein of unknown function (DUF 659) (DUF659) Genomic Order:  2
Name:  ? Cagra.12215s0002 Secondary Identifier:  ? PAC:28908923
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12215s0002 0.5kb upstream 0.5kb upstream 4739 true Scaffold12215: 7085-11823 Capsella grandiflora
Cagra.12215s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12215: 11324-11823 Capsella grandiflora
Cagra.12215s0002 0.5kb downstream 0.5kb downstream 4739 true Scaffold12215: 6585-11323 Capsella grandiflora
Cagra.12215s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12215: 6585-7084 Capsella grandiflora
Cagra.12215s0002 1.0kb upstream 1.0kb upstream 5239 true Scaffold12215: 7085-12323 Capsella grandiflora
Cagra.12215s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12215: 11324-12323 Capsella grandiflora
Cagra.12215s0002 1.0kb downstream 1.0kb downstream 5239 true Scaffold12215: 6085-11323 Capsella grandiflora
Cagra.12215s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12215: 6085-7084 Capsella grandiflora
Cagra.12215s0002 2.0kb upstream 2.0kb upstream 6239 true Scaffold12215: 7085-13323 Capsella grandiflora
Cagra.12215s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12215: 11324-13323 Capsella grandiflora
Cagra.12215s0002 2.0kb downstream 2.0kb downstream 6239 true Scaffold12215: 5085-11323 Capsella grandiflora
Cagra.12215s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12215: 5085-7084 Capsella grandiflora
Cagra.12215s0002 5.0kb upstream 5.0kb upstream 9239 true Scaffold12215: 7085-16323 Capsella grandiflora
Cagra.12215s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12215: 11324-16323 Capsella grandiflora
Cagra.12215s0002 5.0kb downstream 5.0kb downstream 9239 true Scaffold12215: 2085-11323 Capsella grandiflora
Cagra.12215s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12215: 2085-7084 Capsella grandiflora
Cagra.12215s0002 10.0kb upstream 10.0kb upstream 14239 true Scaffold12215: 7085-21323 Capsella grandiflora
Cagra.12215s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold12215: 11324-21323 Capsella grandiflora
Cagra.12215s0002 10.0kb downstream 10.0kb downstream 11323 true Scaffold12215: 1-11323 Capsella grandiflora
Cagra.12215s0002 10.0kb downstream 10.0kb downstream 7084 false Scaffold12215: 1-7084 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382021 5261 Brassicaceae View MSA
123840682 5264 Brassicales-Malvales View MSA
124322769 5266 SBM View MSA
124250405 5268 Malvidae View MSA
124040304 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain