Gene : Cagra.12385s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23336:SF10 - B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED Genomic Order:  7
Name:  ? Cagra.12385s0007 Secondary Identifier:  ? PAC:28896831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12385s0007 0.5kb upstream 0.5kb upstream 6425 true Scaffold12385: 16808-23232 Capsella grandiflora
Cagra.12385s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold12385: 16808-17307 Capsella grandiflora
Cagra.12385s0007 0.5kb downstream 0.5kb downstream 6425 true Scaffold12385: 17308-23732 Capsella grandiflora
Cagra.12385s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold12385: 23233-23732 Capsella grandiflora
Cagra.12385s0007 1.0kb upstream 1.0kb upstream 6925 true Scaffold12385: 16308-23232 Capsella grandiflora
Cagra.12385s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold12385: 16308-17307 Capsella grandiflora
Cagra.12385s0007 1.0kb downstream 1.0kb downstream 6925 true Scaffold12385: 17308-24232 Capsella grandiflora
Cagra.12385s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold12385: 23233-24232 Capsella grandiflora
Cagra.12385s0007 2.0kb upstream 2.0kb upstream 7925 true Scaffold12385: 15308-23232 Capsella grandiflora
Cagra.12385s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold12385: 15308-17307 Capsella grandiflora
Cagra.12385s0007 2.0kb downstream 2.0kb downstream 7925 true Scaffold12385: 17308-25232 Capsella grandiflora
Cagra.12385s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold12385: 23233-25232 Capsella grandiflora
Cagra.12385s0007 5.0kb upstream 5.0kb upstream 10925 true Scaffold12385: 12308-23232 Capsella grandiflora
Cagra.12385s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold12385: 12308-17307 Capsella grandiflora
Cagra.12385s0007 5.0kb downstream 5.0kb downstream 10925 true Scaffold12385: 17308-28232 Capsella grandiflora
Cagra.12385s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold12385: 23233-28232 Capsella grandiflora
Cagra.12385s0007 10.0kb upstream 10.0kb upstream 15925 true Scaffold12385: 7308-23232 Capsella grandiflora
Cagra.12385s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold12385: 7308-17307 Capsella grandiflora
Cagra.12385s0007 10.0kb downstream 10.0kb downstream 15925 true Scaffold12385: 17308-33232 Capsella grandiflora
Cagra.12385s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold12385: 23233-33232 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375406 5261 Brassicaceae View MSA
123834099 5264 Brassicales-Malvales View MSA
124340233 5266 SBM View MSA
124239264 5268 Malvidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain