Gene : Cagra.12393s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  2
Name:  ? Cagra.12393s0002 Secondary Identifier:  ? PAC:28898626
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12393s0002 0.5kb upstream 0.5kb upstream 2352 true Scaffold12393: 1843-4194 Capsella grandiflora
Cagra.12393s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12393: 3695-4194 Capsella grandiflora
Cagra.12393s0002 0.5kb downstream 0.5kb downstream 2352 true Scaffold12393: 1343-3694 Capsella grandiflora
Cagra.12393s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12393: 1343-1842 Capsella grandiflora
Cagra.12393s0002 1.0kb upstream 1.0kb upstream 2852 true Scaffold12393: 1843-4694 Capsella grandiflora
Cagra.12393s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12393: 3695-4694 Capsella grandiflora
Cagra.12393s0002 1.0kb downstream 1.0kb downstream 2852 true Scaffold12393: 843-3694 Capsella grandiflora
Cagra.12393s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12393: 843-1842 Capsella grandiflora
Cagra.12393s0002 2.0kb upstream 2.0kb upstream 3852 true Scaffold12393: 1843-5694 Capsella grandiflora
Cagra.12393s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12393: 3695-5694 Capsella grandiflora
Cagra.12393s0002 2.0kb downstream 2.0kb downstream 3694 true Scaffold12393: 1-3694 Capsella grandiflora
Cagra.12393s0002 2.0kb downstream 2.0kb downstream 1842 false Scaffold12393: 1-1842 Capsella grandiflora
Cagra.12393s0002 5.0kb upstream 5.0kb upstream 6852 true Scaffold12393: 1843-8694 Capsella grandiflora
Cagra.12393s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12393: 3695-8694 Capsella grandiflora
Cagra.12393s0002 5.0kb downstream 5.0kb downstream 3694 true Scaffold12393: 1-3694 Capsella grandiflora
Cagra.12393s0002 5.0kb downstream 5.0kb downstream 1842 false Scaffold12393: 1-1842 Capsella grandiflora
Cagra.12393s0002 10.0kb upstream 10.0kb upstream 7939 true Scaffold12393: 1843-9781 Capsella grandiflora
Cagra.12393s0002 10.0kb upstream 10.0kb upstream 6087 false Scaffold12393: 3695-9781 Capsella grandiflora
Cagra.12393s0002 10.0kb downstream 10.0kb downstream 3694 true Scaffold12393: 1-3694 Capsella grandiflora
Cagra.12393s0002 10.0kb downstream 10.0kb downstream 1842 false Scaffold12393: 1-1842 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337959 5261 Brassicaceae View MSA
123778584 5264 Brassicales-Malvales View MSA
124276926 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain