Gene : Cagra.12398s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.12398s0001 Secondary Identifier:  ? PAC:28909382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12398s0001 0.5kb upstream 0.5kb upstream 1969 true Scaffold12398: 1-1969 Capsella grandiflora
Cagra.12398s0001 0.5kb upstream 0.5kb upstream 164 false Scaffold12398: 1-164 Capsella grandiflora
Cagra.12398s0001 0.5kb downstream 0.5kb downstream 2305 true Scaffold12398: 165-2469 Capsella grandiflora
Cagra.12398s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12398: 1970-2469 Capsella grandiflora
Cagra.12398s0001 1.0kb upstream 1.0kb upstream 1969 true Scaffold12398: 1-1969 Capsella grandiflora
Cagra.12398s0001 1.0kb upstream 1.0kb upstream 164 false Scaffold12398: 1-164 Capsella grandiflora
Cagra.12398s0001 1.0kb downstream 1.0kb downstream 2805 true Scaffold12398: 165-2969 Capsella grandiflora
Cagra.12398s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12398: 1970-2969 Capsella grandiflora
Cagra.12398s0001 2.0kb upstream 2.0kb upstream 1969 true Scaffold12398: 1-1969 Capsella grandiflora
Cagra.12398s0001 2.0kb upstream 2.0kb upstream 164 false Scaffold12398: 1-164 Capsella grandiflora
Cagra.12398s0001 2.0kb downstream 2.0kb downstream 3805 true Scaffold12398: 165-3969 Capsella grandiflora
Cagra.12398s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12398: 1970-3969 Capsella grandiflora
Cagra.12398s0001 5.0kb upstream 5.0kb upstream 1969 true Scaffold12398: 1-1969 Capsella grandiflora
Cagra.12398s0001 5.0kb upstream 5.0kb upstream 164 false Scaffold12398: 1-164 Capsella grandiflora
Cagra.12398s0001 5.0kb downstream 5.0kb downstream 6805 true Scaffold12398: 165-6969 Capsella grandiflora
Cagra.12398s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12398: 1970-6969 Capsella grandiflora
Cagra.12398s0001 10.0kb upstream 10.0kb upstream 1969 true Scaffold12398: 1-1969 Capsella grandiflora
Cagra.12398s0001 10.0kb upstream 10.0kb upstream 164 false Scaffold12398: 1-164 Capsella grandiflora
Cagra.12398s0001 10.0kb downstream 10.0kb downstream 11805 true Scaffold12398: 165-11969 Capsella grandiflora
Cagra.12398s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12398: 1970-11969 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
122363221 5261 Brassicaceae View MSA
123830742 5264 Brassicales-Malvales View MSA
124340692 5266 SBM View MSA
124242807 5268 Malvidae View MSA
124060703 5270 Rosid View MSA
123740404 5271 Pentapetalae View MSA
122791763 5272 Eudicot View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain