Gene : Cagra.12398s0006 C. grandiflora v1.1
Defline:  (1 of 1) PF14770 - Transmembrane protein 18 (TMEM18) Genomic Order:  6
Name:  ? Cagra.12398s0006 Secondary Identifier:  ? PAC:28909387
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12398s0006 0.5kb upstream 0.5kb upstream 2286 true Scaffold12398: 21881-24166 Capsella grandiflora
Cagra.12398s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold12398: 23667-24166 Capsella grandiflora
Cagra.12398s0006 0.5kb downstream 0.5kb downstream 2286 true Scaffold12398: 21381-23666 Capsella grandiflora
Cagra.12398s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold12398: 21381-21880 Capsella grandiflora
Cagra.12398s0006 1.0kb upstream 1.0kb upstream 2786 true Scaffold12398: 21881-24666 Capsella grandiflora
Cagra.12398s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold12398: 23667-24666 Capsella grandiflora
Cagra.12398s0006 1.0kb downstream 1.0kb downstream 2786 true Scaffold12398: 20881-23666 Capsella grandiflora
Cagra.12398s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold12398: 20881-21880 Capsella grandiflora
Cagra.12398s0006 2.0kb upstream 2.0kb upstream 3786 true Scaffold12398: 21881-25666 Capsella grandiflora
Cagra.12398s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold12398: 23667-25666 Capsella grandiflora
Cagra.12398s0006 2.0kb downstream 2.0kb downstream 3786 true Scaffold12398: 19881-23666 Capsella grandiflora
Cagra.12398s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold12398: 19881-21880 Capsella grandiflora
Cagra.12398s0006 5.0kb upstream 5.0kb upstream 6786 true Scaffold12398: 21881-28666 Capsella grandiflora
Cagra.12398s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold12398: 23667-28666 Capsella grandiflora
Cagra.12398s0006 5.0kb downstream 5.0kb downstream 6786 true Scaffold12398: 16881-23666 Capsella grandiflora
Cagra.12398s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold12398: 16881-21880 Capsella grandiflora
Cagra.12398s0006 10.0kb upstream 10.0kb upstream 11786 true Scaffold12398: 21881-33666 Capsella grandiflora
Cagra.12398s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold12398: 23667-33666 Capsella grandiflora
Cagra.12398s0006 10.0kb downstream 10.0kb downstream 11786 true Scaffold12398: 11881-23666 Capsella grandiflora
Cagra.12398s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold12398: 11881-21880 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368207 5261 Brassicaceae View MSA
123832969 5264 Brassicales-Malvales View MSA
124341052 5266 SBM View MSA
124242104 5268 Malvidae View MSA
124064626 5270 Rosid View MSA
123738395 5271 Pentapetalae View MSA
122787911 5272 Eudicot View MSA
122046427 5273 Angiosperm View MSA
121346161 5274 Embryophyte View MSA
123424935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain