Gene : Cagra.12398s0008 C. grandiflora v1.1
Defline:  (1 of 6) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  8
Name:  ? Cagra.12398s0008 Secondary Identifier:  ? PAC:28909385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12398s0008 0.5kb upstream 0.5kb upstream 4568 true Scaffold12398: 27740-32307 Capsella grandiflora
Cagra.12398s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold12398: 31808-32307 Capsella grandiflora
Cagra.12398s0008 0.5kb downstream 0.5kb downstream 4568 true Scaffold12398: 27240-31807 Capsella grandiflora
Cagra.12398s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold12398: 27240-27739 Capsella grandiflora
Cagra.12398s0008 1.0kb upstream 1.0kb upstream 5068 true Scaffold12398: 27740-32807 Capsella grandiflora
Cagra.12398s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold12398: 31808-32807 Capsella grandiflora
Cagra.12398s0008 1.0kb downstream 1.0kb downstream 5068 true Scaffold12398: 26740-31807 Capsella grandiflora
Cagra.12398s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold12398: 26740-27739 Capsella grandiflora
Cagra.12398s0008 2.0kb upstream 2.0kb upstream 6068 true Scaffold12398: 27740-33807 Capsella grandiflora
Cagra.12398s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold12398: 31808-33807 Capsella grandiflora
Cagra.12398s0008 2.0kb downstream 2.0kb downstream 6068 true Scaffold12398: 25740-31807 Capsella grandiflora
Cagra.12398s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold12398: 25740-27739 Capsella grandiflora
Cagra.12398s0008 5.0kb upstream 5.0kb upstream 9068 true Scaffold12398: 27740-36807 Capsella grandiflora
Cagra.12398s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold12398: 31808-36807 Capsella grandiflora
Cagra.12398s0008 5.0kb downstream 5.0kb downstream 9068 true Scaffold12398: 22740-31807 Capsella grandiflora
Cagra.12398s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold12398: 22740-27739 Capsella grandiflora
Cagra.12398s0008 10.0kb upstream 10.0kb upstream 13529 true Scaffold12398: 27740-41268 Capsella grandiflora
Cagra.12398s0008 10.0kb upstream 10.0kb upstream 9461 false Scaffold12398: 31808-41268 Capsella grandiflora
Cagra.12398s0008 10.0kb downstream 10.0kb downstream 14068 true Scaffold12398: 17740-31807 Capsella grandiflora
Cagra.12398s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold12398: 17740-27739 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366769 5261 Brassicaceae View MSA
123836286 5264 Brassicales-Malvales View MSA
124341415 5266 SBM View MSA
124237697 5268 Malvidae View MSA
124062603 5270 Rosid View MSA
123740841 5271 Pentapetalae View MSA
122789815 5272 Eudicot View MSA
122047946 5273 Angiosperm View MSA
121344073 5274 Embryophyte View MSA
123379968 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain