Gene : Cagra.11433s0001 C. grandiflora v1.1
Defline:  (1 of 17) PF14111//PF14392 - Domain of unknown function (DUF4283) (DUF4283) // Zinc knuckle (zf-CCHC_4) Genomic Order:  1
Name:  ? Cagra.11433s0001 Secondary Identifier:  ? PAC:28908577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11433s0001 0.5kb upstream 0.5kb upstream 1462 true Scaffold11433: 76-1537 Capsella grandiflora
Cagra.11433s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold11433: 76-575 Capsella grandiflora
Cagra.11433s0001 0.5kb downstream 0.5kb downstream 1462 true Scaffold11433: 576-2037 Capsella grandiflora
Cagra.11433s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold11433: 1538-2037 Capsella grandiflora
Cagra.11433s0001 1.0kb upstream 1.0kb upstream 1537 true Scaffold11433: 1-1537 Capsella grandiflora
Cagra.11433s0001 1.0kb upstream 1.0kb upstream 575 false Scaffold11433: 1-575 Capsella grandiflora
Cagra.11433s0001 1.0kb downstream 1.0kb downstream 1962 true Scaffold11433: 576-2537 Capsella grandiflora
Cagra.11433s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold11433: 1538-2537 Capsella grandiflora
Cagra.11433s0001 2.0kb upstream 2.0kb upstream 1537 true Scaffold11433: 1-1537 Capsella grandiflora
Cagra.11433s0001 2.0kb upstream 2.0kb upstream 575 false Scaffold11433: 1-575 Capsella grandiflora
Cagra.11433s0001 2.0kb downstream 2.0kb downstream 2962 true Scaffold11433: 576-3537 Capsella grandiflora
Cagra.11433s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold11433: 1538-3537 Capsella grandiflora
Cagra.11433s0001 5.0kb upstream 5.0kb upstream 1537 true Scaffold11433: 1-1537 Capsella grandiflora
Cagra.11433s0001 5.0kb upstream 5.0kb upstream 575 false Scaffold11433: 1-575 Capsella grandiflora
Cagra.11433s0001 5.0kb downstream 5.0kb downstream 5962 true Scaffold11433: 576-6537 Capsella grandiflora
Cagra.11433s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold11433: 1538-6537 Capsella grandiflora
Cagra.11433s0001 10.0kb upstream 10.0kb upstream 1537 true Scaffold11433: 1-1537 Capsella grandiflora
Cagra.11433s0001 10.0kb upstream 10.0kb upstream 575 false Scaffold11433: 1-575 Capsella grandiflora
Cagra.11433s0001 10.0kb downstream 10.0kb downstream 5998 true Scaffold11433: 576-6573 Capsella grandiflora
Cagra.11433s0001 10.0kb downstream 10.0kb downstream 5036 false Scaffold11433: 1538-6573 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334566 5261 Brassicaceae View MSA
123775386 5264 Brassicales-Malvales View MSA
124273796 5266 SBM View MSA
124129349 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain