Gene : Cagra.11446s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31989:SF6 - F12P19.8 PROTEIN Genomic Order:  3
Name:  ? Cagra.11446s0003 Secondary Identifier:  ? PAC:28913800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11446s0003 0.5kb upstream 0.5kb upstream 3648 true Scaffold11446: 18258-21905 Capsella grandiflora
Cagra.11446s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11446: 18258-18757 Capsella grandiflora
Cagra.11446s0003 0.5kb downstream 0.5kb downstream 3648 true Scaffold11446: 18758-22405 Capsella grandiflora
Cagra.11446s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11446: 21906-22405 Capsella grandiflora
Cagra.11446s0003 1.0kb upstream 1.0kb upstream 4148 true Scaffold11446: 17758-21905 Capsella grandiflora
Cagra.11446s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11446: 17758-18757 Capsella grandiflora
Cagra.11446s0003 1.0kb downstream 1.0kb downstream 4148 true Scaffold11446: 18758-22905 Capsella grandiflora
Cagra.11446s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11446: 21906-22905 Capsella grandiflora
Cagra.11446s0003 2.0kb upstream 2.0kb upstream 5148 true Scaffold11446: 16758-21905 Capsella grandiflora
Cagra.11446s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11446: 16758-18757 Capsella grandiflora
Cagra.11446s0003 2.0kb downstream 2.0kb downstream 5148 true Scaffold11446: 18758-23905 Capsella grandiflora
Cagra.11446s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11446: 21906-23905 Capsella grandiflora
Cagra.11446s0003 5.0kb upstream 5.0kb upstream 8148 true Scaffold11446: 13758-21905 Capsella grandiflora
Cagra.11446s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11446: 13758-18757 Capsella grandiflora
Cagra.11446s0003 5.0kb downstream 5.0kb downstream 8148 true Scaffold11446: 18758-26905 Capsella grandiflora
Cagra.11446s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11446: 21906-26905 Capsella grandiflora
Cagra.11446s0003 10.0kb upstream 10.0kb upstream 13148 true Scaffold11446: 8758-21905 Capsella grandiflora
Cagra.11446s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold11446: 8758-18757 Capsella grandiflora
Cagra.11446s0003 10.0kb downstream 10.0kb downstream 13148 true Scaffold11446: 18758-31905 Capsella grandiflora
Cagra.11446s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11446: 21906-31905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366128 5261 Brassicaceae View MSA
123833421 5264 Brassicales-Malvales View MSA
124350963 5266 SBM View MSA
124236862 5268 Malvidae View MSA
124065157 5270 Rosid View MSA
123749136 5271 Pentapetalae View MSA
122793090 5272 Eudicot View MSA
122045532 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain