Gene : Cagra.11546s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  16
Name:  ? Cagra.11546s0016 Secondary Identifier:  ? PAC:28897660
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7193 Capsella grandiflora pathologic  
Cgrandiflora PWY-7196 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0016 0.5kb upstream 0.5kb upstream 4517 true Scaffold11546: 67729-72245 Capsella grandiflora
Cagra.11546s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 71746-72245 Capsella grandiflora
Cagra.11546s0016 0.5kb downstream 0.5kb downstream 4517 true Scaffold11546: 67229-71745 Capsella grandiflora
Cagra.11546s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 67229-67728 Capsella grandiflora
Cagra.11546s0016 1.0kb upstream 1.0kb upstream 5017 true Scaffold11546: 67729-72745 Capsella grandiflora
Cagra.11546s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 71746-72745 Capsella grandiflora
Cagra.11546s0016 1.0kb downstream 1.0kb downstream 5017 true Scaffold11546: 66729-71745 Capsella grandiflora
Cagra.11546s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 66729-67728 Capsella grandiflora
Cagra.11546s0016 2.0kb upstream 2.0kb upstream 6017 true Scaffold11546: 67729-73745 Capsella grandiflora
Cagra.11546s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 71746-73745 Capsella grandiflora
Cagra.11546s0016 2.0kb downstream 2.0kb downstream 6017 true Scaffold11546: 65729-71745 Capsella grandiflora
Cagra.11546s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 65729-67728 Capsella grandiflora
Cagra.11546s0016 5.0kb upstream 5.0kb upstream 9017 true Scaffold11546: 67729-76745 Capsella grandiflora
Cagra.11546s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 71746-76745 Capsella grandiflora
Cagra.11546s0016 5.0kb downstream 5.0kb downstream 9017 true Scaffold11546: 62729-71745 Capsella grandiflora
Cagra.11546s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 62729-67728 Capsella grandiflora
Cagra.11546s0016 10.0kb upstream 10.0kb upstream 9848 true Scaffold11546: 67729-77576 Capsella grandiflora
Cagra.11546s0016 10.0kb upstream 10.0kb upstream 5831 false Scaffold11546: 71746-77576 Capsella grandiflora
Cagra.11546s0016 10.0kb downstream 10.0kb downstream 14017 true Scaffold11546: 57729-71745 Capsella grandiflora
Cagra.11546s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 57729-67728 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365450 5261 Brassicaceae View MSA
123834411 5264 Brassicales-Malvales View MSA
124342752 5266 SBM View MSA
124251331 5268 Malvidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain