Gene : Cagra.11546s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10803//PTHR10803:SF2 - ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE Genomic Order:  5
Name:  ? Cagra.11546s0005 Secondary Identifier:  ? PAC:28897667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0005 0.5kb upstream 0.5kb upstream 3126 true Scaffold11546: 21086-24211 Capsella grandiflora
Cagra.11546s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 21086-21585 Capsella grandiflora
Cagra.11546s0005 0.5kb downstream 0.5kb downstream 3126 true Scaffold11546: 21586-24711 Capsella grandiflora
Cagra.11546s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 24212-24711 Capsella grandiflora
Cagra.11546s0005 1.0kb upstream 1.0kb upstream 3626 true Scaffold11546: 20586-24211 Capsella grandiflora
Cagra.11546s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 20586-21585 Capsella grandiflora
Cagra.11546s0005 1.0kb downstream 1.0kb downstream 3626 true Scaffold11546: 21586-25211 Capsella grandiflora
Cagra.11546s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 24212-25211 Capsella grandiflora
Cagra.11546s0005 2.0kb upstream 2.0kb upstream 4626 true Scaffold11546: 19586-24211 Capsella grandiflora
Cagra.11546s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 19586-21585 Capsella grandiflora
Cagra.11546s0005 2.0kb downstream 2.0kb downstream 4626 true Scaffold11546: 21586-26211 Capsella grandiflora
Cagra.11546s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 24212-26211 Capsella grandiflora
Cagra.11546s0005 5.0kb upstream 5.0kb upstream 7626 true Scaffold11546: 16586-24211 Capsella grandiflora
Cagra.11546s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 16586-21585 Capsella grandiflora
Cagra.11546s0005 5.0kb downstream 5.0kb downstream 7626 true Scaffold11546: 21586-29211 Capsella grandiflora
Cagra.11546s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 24212-29211 Capsella grandiflora
Cagra.11546s0005 10.0kb upstream 10.0kb upstream 12626 true Scaffold11546: 11586-24211 Capsella grandiflora
Cagra.11546s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold11546: 11586-21585 Capsella grandiflora
Cagra.11546s0005 10.0kb downstream 10.0kb downstream 12626 true Scaffold11546: 21586-34211 Capsella grandiflora
Cagra.11546s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 24212-34211 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367570 5261 Brassicaceae View MSA
123828513 5264 Brassicales-Malvales View MSA
124345659 5266 SBM View MSA
124241646 5268 Malvidae View MSA
124074878 5270 Rosid View MSA
123743074 5271 Pentapetalae View MSA
122792393 5272 Eudicot View MSA
122045230 5273 Angiosperm View MSA
121344575 5274 Embryophyte View MSA
123380067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain