Gene : Cagra.11546s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31079:SF9 - NAC DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  3
Name:  ? Cagra.11546s0003 Secondary Identifier:  ? PAC:28897675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0003 0.5kb upstream 0.5kb upstream 3731 true Scaffold11546: 15286-19016 Capsella grandiflora
Cagra.11546s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 18517-19016 Capsella grandiflora
Cagra.11546s0003 0.5kb downstream 0.5kb downstream 3731 true Scaffold11546: 14786-18516 Capsella grandiflora
Cagra.11546s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 14786-15285 Capsella grandiflora
Cagra.11546s0003 1.0kb upstream 1.0kb upstream 4231 true Scaffold11546: 15286-19516 Capsella grandiflora
Cagra.11546s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 18517-19516 Capsella grandiflora
Cagra.11546s0003 1.0kb downstream 1.0kb downstream 4231 true Scaffold11546: 14286-18516 Capsella grandiflora
Cagra.11546s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 14286-15285 Capsella grandiflora
Cagra.11546s0003 2.0kb upstream 2.0kb upstream 5231 true Scaffold11546: 15286-20516 Capsella grandiflora
Cagra.11546s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 18517-20516 Capsella grandiflora
Cagra.11546s0003 2.0kb downstream 2.0kb downstream 5231 true Scaffold11546: 13286-18516 Capsella grandiflora
Cagra.11546s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 13286-15285 Capsella grandiflora
Cagra.11546s0003 5.0kb upstream 5.0kb upstream 8231 true Scaffold11546: 15286-23516 Capsella grandiflora
Cagra.11546s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 18517-23516 Capsella grandiflora
Cagra.11546s0003 5.0kb downstream 5.0kb downstream 8231 true Scaffold11546: 10286-18516 Capsella grandiflora
Cagra.11546s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 10286-15285 Capsella grandiflora
Cagra.11546s0003 10.0kb upstream 10.0kb upstream 13231 true Scaffold11546: 15286-28516 Capsella grandiflora
Cagra.11546s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold11546: 18517-28516 Capsella grandiflora
Cagra.11546s0003 10.0kb downstream 10.0kb downstream 13231 true Scaffold11546: 5286-18516 Capsella grandiflora
Cagra.11546s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 5286-15285 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371911 5261 Brassicaceae View MSA
123840778 5264 Brassicales-Malvales View MSA
124336482 5266 SBM View MSA
124237737 5268 Malvidae View MSA
124068274 5270 Rosid View MSA
123741420 5271 Pentapetalae View MSA
122787811 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain