Gene : Cagra.11546s0013 C. grandiflora v1.1
Defline:  (1 of 2) KOG3197 - Predicted hydrolases of HD superfamily Genomic Order:  13
Name:  ? Cagra.11546s0013 Secondary Identifier:  ? PAC:28897673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0013 0.5kb upstream 0.5kb upstream 3075 true Scaffold11546: 54581-57655 Capsella grandiflora
Cagra.11546s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 57156-57655 Capsella grandiflora
Cagra.11546s0013 0.5kb downstream 0.5kb downstream 3075 true Scaffold11546: 54081-57155 Capsella grandiflora
Cagra.11546s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 54081-54580 Capsella grandiflora
Cagra.11546s0013 1.0kb upstream 1.0kb upstream 3575 true Scaffold11546: 54581-58155 Capsella grandiflora
Cagra.11546s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 57156-58155 Capsella grandiflora
Cagra.11546s0013 1.0kb downstream 1.0kb downstream 3575 true Scaffold11546: 53581-57155 Capsella grandiflora
Cagra.11546s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 53581-54580 Capsella grandiflora
Cagra.11546s0013 2.0kb upstream 2.0kb upstream 4575 true Scaffold11546: 54581-59155 Capsella grandiflora
Cagra.11546s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 57156-59155 Capsella grandiflora
Cagra.11546s0013 2.0kb downstream 2.0kb downstream 4575 true Scaffold11546: 52581-57155 Capsella grandiflora
Cagra.11546s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 52581-54580 Capsella grandiflora
Cagra.11546s0013 5.0kb upstream 5.0kb upstream 7575 true Scaffold11546: 54581-62155 Capsella grandiflora
Cagra.11546s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 57156-62155 Capsella grandiflora
Cagra.11546s0013 5.0kb downstream 5.0kb downstream 7575 true Scaffold11546: 49581-57155 Capsella grandiflora
Cagra.11546s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 49581-54580 Capsella grandiflora
Cagra.11546s0013 10.0kb upstream 10.0kb upstream 12575 true Scaffold11546: 54581-67155 Capsella grandiflora
Cagra.11546s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold11546: 57156-67155 Capsella grandiflora
Cagra.11546s0013 10.0kb downstream 10.0kb downstream 12575 true Scaffold11546: 44581-57155 Capsella grandiflora
Cagra.11546s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 44581-54580 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371229 5261 Brassicaceae View MSA
123841478 5264 Brassicales-Malvales View MSA
124336648 5266 SBM View MSA
124241717 5268 Malvidae View MSA
124067824 5270 Rosid View MSA
123740034 5271 Pentapetalae View MSA
122787249 5272 Eudicot View MSA
122044322 5273 Angiosperm View MSA
121348653 5274 Embryophyte View MSA
123428569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain