Gene : Cagra.11786s0009 C. grandiflora v1.1
Defline:  (1 of 28) PF00069//PF00560//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  9
Name:  ? Cagra.11786s0009 Secondary Identifier:  ? PAC:28912486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11786s0009 0.5kb upstream 0.5kb upstream 3982 true Scaffold11786: 30024-34005 Capsella grandiflora
Cagra.11786s0009 0.5kb upstream 0.5kb upstream 209 false Scaffold11786: 33797-34005 Capsella grandiflora
Cagra.11786s0009 0.5kb downstream 0.5kb downstream 4273 true Scaffold11786: 29524-33796 Capsella grandiflora
Cagra.11786s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold11786: 29524-30023 Capsella grandiflora
Cagra.11786s0009 1.0kb upstream 1.0kb upstream 3982 true Scaffold11786: 30024-34005 Capsella grandiflora
Cagra.11786s0009 1.0kb upstream 1.0kb upstream 209 false Scaffold11786: 33797-34005 Capsella grandiflora
Cagra.11786s0009 1.0kb downstream 1.0kb downstream 4773 true Scaffold11786: 29024-33796 Capsella grandiflora
Cagra.11786s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold11786: 29024-30023 Capsella grandiflora
Cagra.11786s0009 2.0kb upstream 2.0kb upstream 3982 true Scaffold11786: 30024-34005 Capsella grandiflora
Cagra.11786s0009 2.0kb upstream 2.0kb upstream 209 false Scaffold11786: 33797-34005 Capsella grandiflora
Cagra.11786s0009 2.0kb downstream 2.0kb downstream 5773 true Scaffold11786: 28024-33796 Capsella grandiflora
Cagra.11786s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold11786: 28024-30023 Capsella grandiflora
Cagra.11786s0009 5.0kb upstream 5.0kb upstream 3982 true Scaffold11786: 30024-34005 Capsella grandiflora
Cagra.11786s0009 5.0kb upstream 5.0kb upstream 209 false Scaffold11786: 33797-34005 Capsella grandiflora
Cagra.11786s0009 5.0kb downstream 5.0kb downstream 8773 true Scaffold11786: 25024-33796 Capsella grandiflora
Cagra.11786s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold11786: 25024-30023 Capsella grandiflora
Cagra.11786s0009 10.0kb upstream 10.0kb upstream 3982 true Scaffold11786: 30024-34005 Capsella grandiflora
Cagra.11786s0009 10.0kb upstream 10.0kb upstream 209 false Scaffold11786: 33797-34005 Capsella grandiflora
Cagra.11786s0009 10.0kb downstream 10.0kb downstream 13773 true Scaffold11786: 20024-33796 Capsella grandiflora
Cagra.11786s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold11786: 20024-30023 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364170 5261 Brassicaceae View MSA
123841624 5264 Brassicales-Malvales View MSA
124351403 5266 SBM View MSA
124254665 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain