Gene : Cagra.11930s0001 C. grandiflora v1.1
Defline:  (1 of 34) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1
Name:  ? Cagra.11930s0001 Secondary Identifier:  ? PAC:28908579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11930s0001 0.5kb upstream 0.5kb upstream 3532 true Scaffold11930: 85-3616 Capsella grandiflora
Cagra.11930s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold11930: 3117-3616 Capsella grandiflora
Cagra.11930s0001 0.5kb downstream 0.5kb downstream 3116 true Scaffold11930: 1-3116 Capsella grandiflora
Cagra.11930s0001 0.5kb downstream 0.5kb downstream 84 false Scaffold11930: 1-84 Capsella grandiflora
Cagra.11930s0001 1.0kb upstream 1.0kb upstream 4032 true Scaffold11930: 85-4116 Capsella grandiflora
Cagra.11930s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold11930: 3117-4116 Capsella grandiflora
Cagra.11930s0001 1.0kb downstream 1.0kb downstream 3116 true Scaffold11930: 1-3116 Capsella grandiflora
Cagra.11930s0001 1.0kb downstream 1.0kb downstream 84 false Scaffold11930: 1-84 Capsella grandiflora
Cagra.11930s0001 2.0kb upstream 2.0kb upstream 5032 true Scaffold11930: 85-5116 Capsella grandiflora
Cagra.11930s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold11930: 3117-5116 Capsella grandiflora
Cagra.11930s0001 2.0kb downstream 2.0kb downstream 3116 true Scaffold11930: 1-3116 Capsella grandiflora
Cagra.11930s0001 2.0kb downstream 2.0kb downstream 84 false Scaffold11930: 1-84 Capsella grandiflora
Cagra.11930s0001 5.0kb upstream 5.0kb upstream 6787 true Scaffold11930: 85-6871 Capsella grandiflora
Cagra.11930s0001 5.0kb upstream 5.0kb upstream 3755 false Scaffold11930: 3117-6871 Capsella grandiflora
Cagra.11930s0001 5.0kb downstream 5.0kb downstream 3116 true Scaffold11930: 1-3116 Capsella grandiflora
Cagra.11930s0001 5.0kb downstream 5.0kb downstream 84 false Scaffold11930: 1-84 Capsella grandiflora
Cagra.11930s0001 10.0kb upstream 10.0kb upstream 6787 true Scaffold11930: 85-6871 Capsella grandiflora
Cagra.11930s0001 10.0kb upstream 10.0kb upstream 3755 false Scaffold11930: 3117-6871 Capsella grandiflora
Cagra.11930s0001 10.0kb downstream 10.0kb downstream 3116 true Scaffold11930: 1-3116 Capsella grandiflora
Cagra.11930s0001 10.0kb downstream 10.0kb downstream 84 false Scaffold11930: 1-84 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376962 5261 Brassicaceae View MSA
123841397 5264 Brassicales-Malvales View MSA
124345823 5266 SBM View MSA
124240061 5268 Malvidae View MSA
124067784 5270 Rosid View MSA
123742991 5271 Pentapetalae View MSA
122787939 5272 Eudicot View MSA
122049764 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351227 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain