Gene : Cagra.12076s0006 C. grandiflora v1.1
Defline:  (1 of 2) PF04073 - Aminoacyl-tRNA editing domain (tRNA_edit) Genomic Order:  6
Name:  ? Cagra.12076s0006 Secondary Identifier:  ? PAC:28907621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12076s0006 0.5kb upstream 0.5kb upstream 3242 true Scaffold12076: 10704-13945 Capsella grandiflora
Cagra.12076s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold12076: 13446-13945 Capsella grandiflora
Cagra.12076s0006 0.5kb downstream 0.5kb downstream 3242 true Scaffold12076: 10204-13445 Capsella grandiflora
Cagra.12076s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold12076: 10204-10703 Capsella grandiflora
Cagra.12076s0006 1.0kb upstream 1.0kb upstream 3742 true Scaffold12076: 10704-14445 Capsella grandiflora
Cagra.12076s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold12076: 13446-14445 Capsella grandiflora
Cagra.12076s0006 1.0kb downstream 1.0kb downstream 3742 true Scaffold12076: 9704-13445 Capsella grandiflora
Cagra.12076s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold12076: 9704-10703 Capsella grandiflora
Cagra.12076s0006 2.0kb upstream 2.0kb upstream 4742 true Scaffold12076: 10704-15445 Capsella grandiflora
Cagra.12076s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold12076: 13446-15445 Capsella grandiflora
Cagra.12076s0006 2.0kb downstream 2.0kb downstream 4742 true Scaffold12076: 8704-13445 Capsella grandiflora
Cagra.12076s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold12076: 8704-10703 Capsella grandiflora
Cagra.12076s0006 5.0kb upstream 5.0kb upstream 7742 true Scaffold12076: 10704-18445 Capsella grandiflora
Cagra.12076s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold12076: 13446-18445 Capsella grandiflora
Cagra.12076s0006 5.0kb downstream 5.0kb downstream 7742 true Scaffold12076: 5704-13445 Capsella grandiflora
Cagra.12076s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold12076: 5704-10703 Capsella grandiflora
Cagra.12076s0006 10.0kb upstream 10.0kb upstream 12742 true Scaffold12076: 10704-23445 Capsella grandiflora
Cagra.12076s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold12076: 13446-23445 Capsella grandiflora
Cagra.12076s0006 10.0kb downstream 10.0kb downstream 12742 true Scaffold12076: 704-13445 Capsella grandiflora
Cagra.12076s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold12076: 704-10703 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361018 5261 Brassicaceae View MSA
123827811 5264 Brassicales-Malvales View MSA
124341726 5266 SBM View MSA
124238417 5268 Malvidae View MSA
124069035 5270 Rosid View MSA
123740763 5271 Pentapetalae View MSA
122788934 5272 Eudicot View MSA
122045827 5273 Angiosperm View MSA
121345961 5274 Embryophyte View MSA
123425466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain