Gene : Cagra.11120s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19375:SF219 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37A-RELATED Genomic Order:  1
Name:  ? Cagra.11120s0001 Secondary Identifier:  ? PAC:28912110
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11120s0001 0.5kb upstream 0.5kb upstream 1217 true Scaffold11120: 14-1230 Capsella grandiflora
Cagra.11120s0001 0.5kb upstream 0.5kb upstream 29 false Scaffold11120: 1202-1230 Capsella grandiflora
Cagra.11120s0001 0.5kb downstream 0.5kb downstream 1201 true Scaffold11120: 1-1201 Capsella grandiflora
Cagra.11120s0001 0.5kb downstream 0.5kb downstream 13 false Scaffold11120: 1-13 Capsella grandiflora
Cagra.11120s0001 1.0kb upstream 1.0kb upstream 1217 true Scaffold11120: 14-1230 Capsella grandiflora
Cagra.11120s0001 1.0kb upstream 1.0kb upstream 29 false Scaffold11120: 1202-1230 Capsella grandiflora
Cagra.11120s0001 1.0kb downstream 1.0kb downstream 1201 true Scaffold11120: 1-1201 Capsella grandiflora
Cagra.11120s0001 1.0kb downstream 1.0kb downstream 13 false Scaffold11120: 1-13 Capsella grandiflora
Cagra.11120s0001 2.0kb upstream 2.0kb upstream 1217 true Scaffold11120: 14-1230 Capsella grandiflora
Cagra.11120s0001 2.0kb upstream 2.0kb upstream 29 false Scaffold11120: 1202-1230 Capsella grandiflora
Cagra.11120s0001 2.0kb downstream 2.0kb downstream 1201 true Scaffold11120: 1-1201 Capsella grandiflora
Cagra.11120s0001 2.0kb downstream 2.0kb downstream 13 false Scaffold11120: 1-13 Capsella grandiflora
Cagra.11120s0001 5.0kb upstream 5.0kb upstream 1217 true Scaffold11120: 14-1230 Capsella grandiflora
Cagra.11120s0001 5.0kb upstream 5.0kb upstream 29 false Scaffold11120: 1202-1230 Capsella grandiflora
Cagra.11120s0001 5.0kb downstream 5.0kb downstream 1201 true Scaffold11120: 1-1201 Capsella grandiflora
Cagra.11120s0001 5.0kb downstream 5.0kb downstream 13 false Scaffold11120: 1-13 Capsella grandiflora
Cagra.11120s0001 10.0kb upstream 10.0kb upstream 1217 true Scaffold11120: 14-1230 Capsella grandiflora
Cagra.11120s0001 10.0kb upstream 10.0kb upstream 29 false Scaffold11120: 1202-1230 Capsella grandiflora
Cagra.11120s0001 10.0kb downstream 10.0kb downstream 1201 true Scaffold11120: 1-1201 Capsella grandiflora
Cagra.11120s0001 10.0kb downstream 10.0kb downstream 13 false Scaffold11120: 1-13 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332329 5261 Brassicaceae Singleton cluster - no MSA
123773407 5264 Brassicales-Malvales Singleton cluster - no MSA
124271892 5266 SBM Singleton cluster - no MSA
124250350 5268 Malvidae View MSA
124075560 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain