Gene : Cagra.11216s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21183 - RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED Genomic Order:  5
Name:  ? Cagra.11216s0005 Secondary Identifier:  ? PAC:28917939
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11216s0005 0.5kb upstream 0.5kb upstream 2253 true Scaffold11216: 23040-25292 Capsella grandiflora
Cagra.11216s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold11216: 24793-25292 Capsella grandiflora
Cagra.11216s0005 0.5kb downstream 0.5kb downstream 2253 true Scaffold11216: 22540-24792 Capsella grandiflora
Cagra.11216s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold11216: 22540-23039 Capsella grandiflora
Cagra.11216s0005 1.0kb upstream 1.0kb upstream 2753 true Scaffold11216: 23040-25792 Capsella grandiflora
Cagra.11216s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold11216: 24793-25792 Capsella grandiflora
Cagra.11216s0005 1.0kb downstream 1.0kb downstream 2753 true Scaffold11216: 22040-24792 Capsella grandiflora
Cagra.11216s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold11216: 22040-23039 Capsella grandiflora
Cagra.11216s0005 2.0kb upstream 2.0kb upstream 3753 true Scaffold11216: 23040-26792 Capsella grandiflora
Cagra.11216s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold11216: 24793-26792 Capsella grandiflora
Cagra.11216s0005 2.0kb downstream 2.0kb downstream 3753 true Scaffold11216: 21040-24792 Capsella grandiflora
Cagra.11216s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold11216: 21040-23039 Capsella grandiflora
Cagra.11216s0005 5.0kb upstream 5.0kb upstream 6753 true Scaffold11216: 23040-29792 Capsella grandiflora
Cagra.11216s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold11216: 24793-29792 Capsella grandiflora
Cagra.11216s0005 5.0kb downstream 5.0kb downstream 6753 true Scaffold11216: 18040-24792 Capsella grandiflora
Cagra.11216s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold11216: 18040-23039 Capsella grandiflora
Cagra.11216s0005 10.0kb upstream 10.0kb upstream 11753 true Scaffold11216: 23040-34792 Capsella grandiflora
Cagra.11216s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold11216: 24793-34792 Capsella grandiflora
Cagra.11216s0005 10.0kb downstream 10.0kb downstream 11753 true Scaffold11216: 13040-24792 Capsella grandiflora
Cagra.11216s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold11216: 13040-23039 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376448 5261 Brassicaceae View MSA
123839459 5264 Brassicales-Malvales View MSA
124341427 5266 SBM View MSA
124237513 5268 Malvidae View MSA
124065847 5270 Rosid View MSA
123748734 5271 Pentapetalae View MSA
122797701 5272 Eudicot View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain