Gene : Cagra.11315s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11183:SF59 - GALACTINOL SYNTHASE 2-RELATED Genomic Order:  2
Name:  ? Cagra.11315s0002 Secondary Identifier:  ? PAC:28908223
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5337 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11315s0002 0.5kb upstream 0.5kb upstream 2236 true Scaffold11315: 9397-11632 Capsella grandiflora
Cagra.11315s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold11315: 11133-11632 Capsella grandiflora
Cagra.11315s0002 0.5kb downstream 0.5kb downstream 2236 true Scaffold11315: 8897-11132 Capsella grandiflora
Cagra.11315s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold11315: 8897-9396 Capsella grandiflora
Cagra.11315s0002 1.0kb upstream 1.0kb upstream 2736 true Scaffold11315: 9397-12132 Capsella grandiflora
Cagra.11315s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold11315: 11133-12132 Capsella grandiflora
Cagra.11315s0002 1.0kb downstream 1.0kb downstream 2736 true Scaffold11315: 8397-11132 Capsella grandiflora
Cagra.11315s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold11315: 8397-9396 Capsella grandiflora
Cagra.11315s0002 2.0kb upstream 2.0kb upstream 3736 true Scaffold11315: 9397-13132 Capsella grandiflora
Cagra.11315s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold11315: 11133-13132 Capsella grandiflora
Cagra.11315s0002 2.0kb downstream 2.0kb downstream 3736 true Scaffold11315: 7397-11132 Capsella grandiflora
Cagra.11315s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold11315: 7397-9396 Capsella grandiflora
Cagra.11315s0002 5.0kb upstream 5.0kb upstream 6736 true Scaffold11315: 9397-16132 Capsella grandiflora
Cagra.11315s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold11315: 11133-16132 Capsella grandiflora
Cagra.11315s0002 5.0kb downstream 5.0kb downstream 6736 true Scaffold11315: 4397-11132 Capsella grandiflora
Cagra.11315s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold11315: 4397-9396 Capsella grandiflora
Cagra.11315s0002 10.0kb upstream 10.0kb upstream 11736 true Scaffold11315: 9397-21132 Capsella grandiflora
Cagra.11315s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold11315: 11133-21132 Capsella grandiflora
Cagra.11315s0002 10.0kb downstream 10.0kb downstream 11132 true Scaffold11315: 1-11132 Capsella grandiflora
Cagra.11315s0002 10.0kb downstream 10.0kb downstream 9396 false Scaffold11315: 1-9396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368659 5261 Brassicaceae View MSA
123841636 5264 Brassicales-Malvales View MSA
124338100 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain