Gene : Cagra.11298s0004 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24055:SF211 - MITOGEN-ACTIVATED PROTEIN KINASE 16-RELATED Genomic Order:  4
Name:  ? Cagra.11298s0004 Secondary Identifier:  ? PAC:28895971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11298s0004 0.5kb upstream 0.5kb upstream 3482 true Scaffold11298: 5734-9215 Capsella grandiflora
Cagra.11298s0004 0.5kb upstream 0.5kb upstream 203 false Scaffold11298: 9013-9215 Capsella grandiflora
Cagra.11298s0004 0.5kb downstream 0.5kb downstream 3779 true Scaffold11298: 5234-9012 Capsella grandiflora
Cagra.11298s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold11298: 5234-5733 Capsella grandiflora
Cagra.11298s0004 1.0kb upstream 1.0kb upstream 3482 true Scaffold11298: 5734-9215 Capsella grandiflora
Cagra.11298s0004 1.0kb upstream 1.0kb upstream 203 false Scaffold11298: 9013-9215 Capsella grandiflora
Cagra.11298s0004 1.0kb downstream 1.0kb downstream 4279 true Scaffold11298: 4734-9012 Capsella grandiflora
Cagra.11298s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold11298: 4734-5733 Capsella grandiflora
Cagra.11298s0004 2.0kb upstream 2.0kb upstream 3482 true Scaffold11298: 5734-9215 Capsella grandiflora
Cagra.11298s0004 2.0kb upstream 2.0kb upstream 203 false Scaffold11298: 9013-9215 Capsella grandiflora
Cagra.11298s0004 2.0kb downstream 2.0kb downstream 5279 true Scaffold11298: 3734-9012 Capsella grandiflora
Cagra.11298s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold11298: 3734-5733 Capsella grandiflora
Cagra.11298s0004 5.0kb upstream 5.0kb upstream 3482 true Scaffold11298: 5734-9215 Capsella grandiflora
Cagra.11298s0004 5.0kb upstream 5.0kb upstream 203 false Scaffold11298: 9013-9215 Capsella grandiflora
Cagra.11298s0004 5.0kb downstream 5.0kb downstream 8279 true Scaffold11298: 734-9012 Capsella grandiflora
Cagra.11298s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold11298: 734-5733 Capsella grandiflora
Cagra.11298s0004 10.0kb upstream 10.0kb upstream 3482 true Scaffold11298: 5734-9215 Capsella grandiflora
Cagra.11298s0004 10.0kb upstream 10.0kb upstream 203 false Scaffold11298: 9013-9215 Capsella grandiflora
Cagra.11298s0004 10.0kb downstream 10.0kb downstream 9012 true Scaffold11298: 1-9012 Capsella grandiflora
Cagra.11298s0004 10.0kb downstream 10.0kb downstream 5733 false Scaffold11298: 1-5733 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368844 5261 Brassicaceae View MSA
123831326 5264 Brassicales-Malvales View MSA
124337877 5266 SBM View MSA
124253804 5268 Malvidae View MSA
124067422 5270 Rosid View MSA
123746605 5271 Pentapetalae View MSA
122792435 5272 Eudicot View MSA
122041625 5273 Angiosperm View MSA
123428949 5275 Viridiplantae View MSA
121350828 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain