Gene : Cagra.11298s0003 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  3
Name:  ? Cagra.11298s0003 Secondary Identifier:  ? PAC:28895973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11298s0003 0.5kb upstream 0.5kb upstream 2989 true Scaffold11298: 2287-5275 Capsella grandiflora
Cagra.11298s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11298: 2287-2786 Capsella grandiflora
Cagra.11298s0003 0.5kb downstream 0.5kb downstream 2989 true Scaffold11298: 2787-5775 Capsella grandiflora
Cagra.11298s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11298: 5276-5775 Capsella grandiflora
Cagra.11298s0003 1.0kb upstream 1.0kb upstream 3489 true Scaffold11298: 1787-5275 Capsella grandiflora
Cagra.11298s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11298: 1787-2786 Capsella grandiflora
Cagra.11298s0003 1.0kb downstream 1.0kb downstream 3489 true Scaffold11298: 2787-6275 Capsella grandiflora
Cagra.11298s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11298: 5276-6275 Capsella grandiflora
Cagra.11298s0003 2.0kb upstream 2.0kb upstream 4489 true Scaffold11298: 787-5275 Capsella grandiflora
Cagra.11298s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11298: 787-2786 Capsella grandiflora
Cagra.11298s0003 2.0kb downstream 2.0kb downstream 4489 true Scaffold11298: 2787-7275 Capsella grandiflora
Cagra.11298s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11298: 5276-7275 Capsella grandiflora
Cagra.11298s0003 5.0kb upstream 5.0kb upstream 5275 true Scaffold11298: 1-5275 Capsella grandiflora
Cagra.11298s0003 5.0kb upstream 5.0kb upstream 2786 false Scaffold11298: 1-2786 Capsella grandiflora
Cagra.11298s0003 5.0kb downstream 5.0kb downstream 6429 true Scaffold11298: 2787-9215 Capsella grandiflora
Cagra.11298s0003 5.0kb downstream 5.0kb downstream 3940 false Scaffold11298: 5276-9215 Capsella grandiflora
Cagra.11298s0003 10.0kb upstream 10.0kb upstream 5275 true Scaffold11298: 1-5275 Capsella grandiflora
Cagra.11298s0003 10.0kb upstream 10.0kb upstream 2786 false Scaffold11298: 1-2786 Capsella grandiflora
Cagra.11298s0003 10.0kb downstream 10.0kb downstream 6429 true Scaffold11298: 2787-9215 Capsella grandiflora
Cagra.11298s0003 10.0kb downstream 10.0kb downstream 3940 false Scaffold11298: 5276-9215 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122377194 5261 Brassicaceae View MSA
123839948 5264 Brassicales-Malvales View MSA
124347827 5266 SBM View MSA
124244421 5268 Malvidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain