Gene : Cagra.11327s0005 C. grandiflora v1.1
Defline:  (1 of 6) PF07795 - Protein of unknown function (DUF1635) (DUF1635) Genomic Order:  5
Name:  ? Cagra.11327s0005 Secondary Identifier:  ? PAC:28910707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11327s0005 0.5kb upstream 0.5kb upstream 1318 true Scaffold11327: 21513-22830 Capsella grandiflora
Cagra.11327s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold11327: 21513-22012 Capsella grandiflora
Cagra.11327s0005 0.5kb downstream 0.5kb downstream 1318 true Scaffold11327: 22013-23330 Capsella grandiflora
Cagra.11327s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold11327: 22831-23330 Capsella grandiflora
Cagra.11327s0005 1.0kb upstream 1.0kb upstream 1818 true Scaffold11327: 21013-22830 Capsella grandiflora
Cagra.11327s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold11327: 21013-22012 Capsella grandiflora
Cagra.11327s0005 1.0kb downstream 1.0kb downstream 1818 true Scaffold11327: 22013-23830 Capsella grandiflora
Cagra.11327s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold11327: 22831-23830 Capsella grandiflora
Cagra.11327s0005 2.0kb upstream 2.0kb upstream 2818 true Scaffold11327: 20013-22830 Capsella grandiflora
Cagra.11327s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold11327: 20013-22012 Capsella grandiflora
Cagra.11327s0005 2.0kb downstream 2.0kb downstream 2051 true Scaffold11327: 22013-24063 Capsella grandiflora
Cagra.11327s0005 2.0kb downstream 2.0kb downstream 1233 false Scaffold11327: 22831-24063 Capsella grandiflora
Cagra.11327s0005 5.0kb upstream 5.0kb upstream 5818 true Scaffold11327: 17013-22830 Capsella grandiflora
Cagra.11327s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold11327: 17013-22012 Capsella grandiflora
Cagra.11327s0005 5.0kb downstream 5.0kb downstream 2051 true Scaffold11327: 22013-24063 Capsella grandiflora
Cagra.11327s0005 5.0kb downstream 5.0kb downstream 1233 false Scaffold11327: 22831-24063 Capsella grandiflora
Cagra.11327s0005 10.0kb upstream 10.0kb upstream 10818 true Scaffold11327: 12013-22830 Capsella grandiflora
Cagra.11327s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold11327: 12013-22012 Capsella grandiflora
Cagra.11327s0005 10.0kb downstream 10.0kb downstream 2051 true Scaffold11327: 22013-24063 Capsella grandiflora
Cagra.11327s0005 10.0kb downstream 10.0kb downstream 1233 false Scaffold11327: 22831-24063 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371871 5261 Brassicaceae View MSA
123800250 5264 Brassicales-Malvales View MSA
124297689 5266 SBM View MSA
124149516 5268 Malvidae View MSA
123875312 5270 Rosid View MSA
123751096 5271 Pentapetalae View MSA
122788553 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain