Gene : Cagra.10750s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Genomic Order:  1
Name:  ? Cagra.10750s0001 Secondary Identifier:  ? PAC:28901280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10750s0001 0.5kb upstream 0.5kb upstream 1255 true Scaffold10750: 4632-5886 Capsella grandiflora
Cagra.10750s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold10750: 4632-5131 Capsella grandiflora
Cagra.10750s0001 0.5kb downstream 0.5kb downstream 1255 true Scaffold10750: 5132-6386 Capsella grandiflora
Cagra.10750s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10750: 5887-6386 Capsella grandiflora
Cagra.10750s0001 1.0kb upstream 1.0kb upstream 1755 true Scaffold10750: 4132-5886 Capsella grandiflora
Cagra.10750s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold10750: 4132-5131 Capsella grandiflora
Cagra.10750s0001 1.0kb downstream 1.0kb downstream 1755 true Scaffold10750: 5132-6886 Capsella grandiflora
Cagra.10750s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10750: 5887-6886 Capsella grandiflora
Cagra.10750s0001 2.0kb upstream 2.0kb upstream 2755 true Scaffold10750: 3132-5886 Capsella grandiflora
Cagra.10750s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold10750: 3132-5131 Capsella grandiflora
Cagra.10750s0001 2.0kb downstream 2.0kb downstream 2755 true Scaffold10750: 5132-7886 Capsella grandiflora
Cagra.10750s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10750: 5887-7886 Capsella grandiflora
Cagra.10750s0001 5.0kb upstream 5.0kb upstream 5755 true Scaffold10750: 132-5886 Capsella grandiflora
Cagra.10750s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold10750: 132-5131 Capsella grandiflora
Cagra.10750s0001 5.0kb downstream 5.0kb downstream 4217 true Scaffold10750: 5132-9348 Capsella grandiflora
Cagra.10750s0001 5.0kb downstream 5.0kb downstream 3462 false Scaffold10750: 5887-9348 Capsella grandiflora
Cagra.10750s0001 10.0kb upstream 10.0kb upstream 5886 true Scaffold10750: 1-5886 Capsella grandiflora
Cagra.10750s0001 10.0kb upstream 10.0kb upstream 5131 false Scaffold10750: 1-5131 Capsella grandiflora
Cagra.10750s0001 10.0kb downstream 10.0kb downstream 4217 true Scaffold10750: 5132-9348 Capsella grandiflora
Cagra.10750s0001 10.0kb downstream 10.0kb downstream 3462 false Scaffold10750: 5887-9348 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381676 5261 Brassicaceae View MSA
123841323 5264 Brassicales-Malvales View MSA
124322899 5266 SBM View MSA
124252881 5268 Malvidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain