Gene : Cagra.10399s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32467:SF22 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT1 Genomic Order:  13
Name:  ? Cagra.10399s0013 Secondary Identifier:  ? PAC:28906542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10399s0013 0.5kb upstream 0.5kb upstream 3098 true Scaffold10399: 38970-42067 Capsella grandiflora
Cagra.10399s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold10399: 41568-42067 Capsella grandiflora
Cagra.10399s0013 0.5kb downstream 0.5kb downstream 3098 true Scaffold10399: 38470-41567 Capsella grandiflora
Cagra.10399s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold10399: 38470-38969 Capsella grandiflora
Cagra.10399s0013 1.0kb upstream 1.0kb upstream 3598 true Scaffold10399: 38970-42567 Capsella grandiflora
Cagra.10399s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold10399: 41568-42567 Capsella grandiflora
Cagra.10399s0013 1.0kb downstream 1.0kb downstream 3598 true Scaffold10399: 37970-41567 Capsella grandiflora
Cagra.10399s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold10399: 37970-38969 Capsella grandiflora
Cagra.10399s0013 2.0kb upstream 2.0kb upstream 4598 true Scaffold10399: 38970-43567 Capsella grandiflora
Cagra.10399s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold10399: 41568-43567 Capsella grandiflora
Cagra.10399s0013 2.0kb downstream 2.0kb downstream 4598 true Scaffold10399: 36970-41567 Capsella grandiflora
Cagra.10399s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold10399: 36970-38969 Capsella grandiflora
Cagra.10399s0013 5.0kb upstream 5.0kb upstream 5134 true Scaffold10399: 38970-44103 Capsella grandiflora
Cagra.10399s0013 5.0kb upstream 5.0kb upstream 2536 false Scaffold10399: 41568-44103 Capsella grandiflora
Cagra.10399s0013 5.0kb downstream 5.0kb downstream 7598 true Scaffold10399: 33970-41567 Capsella grandiflora
Cagra.10399s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold10399: 33970-38969 Capsella grandiflora
Cagra.10399s0013 10.0kb upstream 10.0kb upstream 5134 true Scaffold10399: 38970-44103 Capsella grandiflora
Cagra.10399s0013 10.0kb upstream 10.0kb upstream 2536 false Scaffold10399: 41568-44103 Capsella grandiflora
Cagra.10399s0013 10.0kb downstream 10.0kb downstream 12598 true Scaffold10399: 28970-41567 Capsella grandiflora
Cagra.10399s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold10399: 28970-38969 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122375959 5261 Brassicaceae View MSA
123801096 5264 Brassicales-Malvales View MSA
124298435 5266 SBM View MSA
124247741 5268 Malvidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain