Gene : Cagra.10420s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31561:SF3 - 3-KETOACYL-COA SYNTHASE 11 Genomic Order:  1
Name:  ? Cagra.10420s0001 Secondary Identifier:  ? PAC:28895178
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10420s0001 0.5kb upstream 0.5kb upstream 2491 true Scaffold10420: 1-2491 Capsella grandiflora
Cagra.10420s0001 0.5kb upstream 0.5kb upstream 349 false Scaffold10420: 1-349 Capsella grandiflora
Cagra.10420s0001 0.5kb downstream 0.5kb downstream 2642 true Scaffold10420: 350-2991 Capsella grandiflora
Cagra.10420s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10420: 2492-2991 Capsella grandiflora
Cagra.10420s0001 1.0kb upstream 1.0kb upstream 2491 true Scaffold10420: 1-2491 Capsella grandiflora
Cagra.10420s0001 1.0kb upstream 1.0kb upstream 349 false Scaffold10420: 1-349 Capsella grandiflora
Cagra.10420s0001 1.0kb downstream 1.0kb downstream 3142 true Scaffold10420: 350-3491 Capsella grandiflora
Cagra.10420s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10420: 2492-3491 Capsella grandiflora
Cagra.10420s0001 2.0kb upstream 2.0kb upstream 2491 true Scaffold10420: 1-2491 Capsella grandiflora
Cagra.10420s0001 2.0kb upstream 2.0kb upstream 349 false Scaffold10420: 1-349 Capsella grandiflora
Cagra.10420s0001 2.0kb downstream 2.0kb downstream 4142 true Scaffold10420: 350-4491 Capsella grandiflora
Cagra.10420s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10420: 2492-4491 Capsella grandiflora
Cagra.10420s0001 5.0kb upstream 5.0kb upstream 2491 true Scaffold10420: 1-2491 Capsella grandiflora
Cagra.10420s0001 5.0kb upstream 5.0kb upstream 349 false Scaffold10420: 1-349 Capsella grandiflora
Cagra.10420s0001 5.0kb downstream 5.0kb downstream 7142 true Scaffold10420: 350-7491 Capsella grandiflora
Cagra.10420s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10420: 2492-7491 Capsella grandiflora
Cagra.10420s0001 10.0kb upstream 10.0kb upstream 2491 true Scaffold10420: 1-2491 Capsella grandiflora
Cagra.10420s0001 10.0kb upstream 10.0kb upstream 349 false Scaffold10420: 1-349 Capsella grandiflora
Cagra.10420s0001 10.0kb downstream 10.0kb downstream 12142 true Scaffold10420: 350-12491 Capsella grandiflora
Cagra.10420s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold10420: 2492-12491 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367334 5261 Brassicaceae View MSA
123828554 5264 Brassicales-Malvales View MSA
124351180 5266 SBM View MSA
124246294 5268 Malvidae View MSA
124069691 5270 Rosid View MSA
123752157 5271 Pentapetalae View MSA
122789250 5272 Eudicot View MSA
122044783 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain