Gene : Cagra.10427s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN Genomic Order:  6
Name:  ? Cagra.10427s0006 Secondary Identifier:  ? PAC:28917468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10427s0006 0.5kb upstream 0.5kb upstream 2261 true Scaffold10427: 24951-27211 Capsella grandiflora
Cagra.10427s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold10427: 24951-25450 Capsella grandiflora
Cagra.10427s0006 0.5kb downstream 0.5kb downstream 2261 true Scaffold10427: 25451-27711 Capsella grandiflora
Cagra.10427s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold10427: 27212-27711 Capsella grandiflora
Cagra.10427s0006 1.0kb upstream 1.0kb upstream 2761 true Scaffold10427: 24451-27211 Capsella grandiflora
Cagra.10427s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold10427: 24451-25450 Capsella grandiflora
Cagra.10427s0006 1.0kb downstream 1.0kb downstream 2761 true Scaffold10427: 25451-28211 Capsella grandiflora
Cagra.10427s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold10427: 27212-28211 Capsella grandiflora
Cagra.10427s0006 2.0kb upstream 2.0kb upstream 3761 true Scaffold10427: 23451-27211 Capsella grandiflora
Cagra.10427s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold10427: 23451-25450 Capsella grandiflora
Cagra.10427s0006 2.0kb downstream 2.0kb downstream 3761 true Scaffold10427: 25451-29211 Capsella grandiflora
Cagra.10427s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold10427: 27212-29211 Capsella grandiflora
Cagra.10427s0006 5.0kb upstream 5.0kb upstream 6761 true Scaffold10427: 20451-27211 Capsella grandiflora
Cagra.10427s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold10427: 20451-25450 Capsella grandiflora
Cagra.10427s0006 5.0kb downstream 5.0kb downstream 6761 true Scaffold10427: 25451-32211 Capsella grandiflora
Cagra.10427s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold10427: 27212-32211 Capsella grandiflora
Cagra.10427s0006 10.0kb upstream 10.0kb upstream 11761 true Scaffold10427: 15451-27211 Capsella grandiflora
Cagra.10427s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold10427: 15451-25450 Capsella grandiflora
Cagra.10427s0006 10.0kb downstream 10.0kb downstream 11761 true Scaffold10427: 25451-37211 Capsella grandiflora
Cagra.10427s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold10427: 27212-37211 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369436 5261 Brassicaceae View MSA
123837373 5264 Brassicales-Malvales View MSA
124346147 5266 SBM View MSA
124239897 5268 Malvidae View MSA
124065077 5270 Rosid View MSA
123745706 5271 Pentapetalae View MSA
122790456 5272 Eudicot View MSA
122045541 5273 Angiosperm View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain