Gene : Cagra.10427s0011 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  11
Name:  ? Cagra.10427s0011 Secondary Identifier:  ? PAC:28917455
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6368 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10427s0011 0.5kb upstream 0.5kb upstream 4254 true Scaffold10427: 34553-38806 Capsella grandiflora
Cagra.10427s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold10427: 38307-38806 Capsella grandiflora
Cagra.10427s0011 0.5kb downstream 0.5kb downstream 4254 true Scaffold10427: 34053-38306 Capsella grandiflora
Cagra.10427s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold10427: 34053-34552 Capsella grandiflora
Cagra.10427s0011 1.0kb upstream 1.0kb upstream 4754 true Scaffold10427: 34553-39306 Capsella grandiflora
Cagra.10427s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold10427: 38307-39306 Capsella grandiflora
Cagra.10427s0011 1.0kb downstream 1.0kb downstream 4754 true Scaffold10427: 33553-38306 Capsella grandiflora
Cagra.10427s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold10427: 33553-34552 Capsella grandiflora
Cagra.10427s0011 2.0kb upstream 2.0kb upstream 5754 true Scaffold10427: 34553-40306 Capsella grandiflora
Cagra.10427s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold10427: 38307-40306 Capsella grandiflora
Cagra.10427s0011 2.0kb downstream 2.0kb downstream 5754 true Scaffold10427: 32553-38306 Capsella grandiflora
Cagra.10427s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold10427: 32553-34552 Capsella grandiflora
Cagra.10427s0011 5.0kb upstream 5.0kb upstream 8754 true Scaffold10427: 34553-43306 Capsella grandiflora
Cagra.10427s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold10427: 38307-43306 Capsella grandiflora
Cagra.10427s0011 5.0kb downstream 5.0kb downstream 8754 true Scaffold10427: 29553-38306 Capsella grandiflora
Cagra.10427s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold10427: 29553-34552 Capsella grandiflora
Cagra.10427s0011 10.0kb upstream 10.0kb upstream 13754 true Scaffold10427: 34553-48306 Capsella grandiflora
Cagra.10427s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold10427: 38307-48306 Capsella grandiflora
Cagra.10427s0011 10.0kb downstream 10.0kb downstream 13754 true Scaffold10427: 24553-38306 Capsella grandiflora
Cagra.10427s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold10427: 24553-34552 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376117 5261 Brassicaceae View MSA
123828423 5264 Brassicales-Malvales View MSA
124343568 5266 SBM View MSA
124242227 5268 Malvidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain