Gene : Cagra.10427s0030 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24349:SF87 - CALCIUM-DEPENDENT PROTEIN KINASE 16-RELATED Genomic Order:  30
Name:  ? Cagra.10427s0030 Secondary Identifier:  ? PAC:28917453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10427s0030 0.5kb upstream 0.5kb upstream 3785 true Scaffold10427: 87741-91525 Capsella grandiflora
Cagra.10427s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold10427: 91026-91525 Capsella grandiflora
Cagra.10427s0030 0.5kb downstream 0.5kb downstream 3785 true Scaffold10427: 87241-91025 Capsella grandiflora
Cagra.10427s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold10427: 87241-87740 Capsella grandiflora
Cagra.10427s0030 1.0kb upstream 1.0kb upstream 4285 true Scaffold10427: 87741-92025 Capsella grandiflora
Cagra.10427s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold10427: 91026-92025 Capsella grandiflora
Cagra.10427s0030 1.0kb downstream 1.0kb downstream 4285 true Scaffold10427: 86741-91025 Capsella grandiflora
Cagra.10427s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold10427: 86741-87740 Capsella grandiflora
Cagra.10427s0030 2.0kb upstream 2.0kb upstream 5285 true Scaffold10427: 87741-93025 Capsella grandiflora
Cagra.10427s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold10427: 91026-93025 Capsella grandiflora
Cagra.10427s0030 2.0kb downstream 2.0kb downstream 5285 true Scaffold10427: 85741-91025 Capsella grandiflora
Cagra.10427s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold10427: 85741-87740 Capsella grandiflora
Cagra.10427s0030 5.0kb upstream 5.0kb upstream 8285 true Scaffold10427: 87741-96025 Capsella grandiflora
Cagra.10427s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold10427: 91026-96025 Capsella grandiflora
Cagra.10427s0030 5.0kb downstream 5.0kb downstream 8285 true Scaffold10427: 82741-91025 Capsella grandiflora
Cagra.10427s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold10427: 82741-87740 Capsella grandiflora
Cagra.10427s0030 10.0kb upstream 10.0kb upstream 13285 true Scaffold10427: 87741-101025 Capsella grandiflora
Cagra.10427s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold10427: 91026-101025 Capsella grandiflora
Cagra.10427s0030 10.0kb downstream 10.0kb downstream 13285 true Scaffold10427: 77741-91025 Capsella grandiflora
Cagra.10427s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold10427: 77741-87740 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376552 5261 Brassicaceae View MSA
123835223 5264 Brassicales-Malvales View MSA
124348770 5266 SBM View MSA
124243532 5268 Malvidae View MSA
124063775 5270 Rosid View MSA
123736489 5271 Pentapetalae View MSA
122791414 5272 Eudicot View MSA
122046992 5273 Angiosperm View MSA
121348543 5274 Embryophyte View MSA
123380907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain