Gene : Cagra.10175s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11969:SF29 - TRANSCRIPTION FACTOR BHLH57-RELATED Genomic Order:  7
Name:  ? Cagra.10175s0007 Secondary Identifier:  ? PAC:28916456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10175s0007 0.5kb upstream 0.5kb upstream 2571 true Scaffold10175: 36545-39115 Capsella grandiflora
Cagra.10175s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold10175: 36545-37044 Capsella grandiflora
Cagra.10175s0007 0.5kb downstream 0.5kb downstream 2104 true Scaffold10175: 37045-39148 Capsella grandiflora
Cagra.10175s0007 0.5kb downstream 0.5kb downstream 33 false Scaffold10175: 39116-39148 Capsella grandiflora
Cagra.10175s0007 1.0kb upstream 1.0kb upstream 3071 true Scaffold10175: 36045-39115 Capsella grandiflora
Cagra.10175s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold10175: 36045-37044 Capsella grandiflora
Cagra.10175s0007 1.0kb downstream 1.0kb downstream 2104 true Scaffold10175: 37045-39148 Capsella grandiflora
Cagra.10175s0007 1.0kb downstream 1.0kb downstream 33 false Scaffold10175: 39116-39148 Capsella grandiflora
Cagra.10175s0007 2.0kb upstream 2.0kb upstream 4071 true Scaffold10175: 35045-39115 Capsella grandiflora
Cagra.10175s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold10175: 35045-37044 Capsella grandiflora
Cagra.10175s0007 2.0kb downstream 2.0kb downstream 2104 true Scaffold10175: 37045-39148 Capsella grandiflora
Cagra.10175s0007 2.0kb downstream 2.0kb downstream 33 false Scaffold10175: 39116-39148 Capsella grandiflora
Cagra.10175s0007 5.0kb upstream 5.0kb upstream 7071 true Scaffold10175: 32045-39115 Capsella grandiflora
Cagra.10175s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold10175: 32045-37044 Capsella grandiflora
Cagra.10175s0007 5.0kb downstream 5.0kb downstream 2104 true Scaffold10175: 37045-39148 Capsella grandiflora
Cagra.10175s0007 5.0kb downstream 5.0kb downstream 33 false Scaffold10175: 39116-39148 Capsella grandiflora
Cagra.10175s0007 10.0kb upstream 10.0kb upstream 12071 true Scaffold10175: 27045-39115 Capsella grandiflora
Cagra.10175s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold10175: 27045-37044 Capsella grandiflora
Cagra.10175s0007 10.0kb downstream 10.0kb downstream 2104 true Scaffold10175: 37045-39148 Capsella grandiflora
Cagra.10175s0007 10.0kb downstream 10.0kb downstream 33 false Scaffold10175: 39116-39148 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372386 5261 Brassicaceae View MSA
123800351 5264 Brassicales-Malvales View MSA
124297770 5266 SBM View MSA
124245244 5268 Malvidae View MSA
124067472 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain