Gene : Cagra.10188s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24351:SF70 - PROTEIN KINASE PINOID 2 Genomic Order:  1
Name:  ? Cagra.10188s0001 Secondary Identifier:  ? PAC:28911667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10188s0001 0.5kb upstream 0.5kb upstream 3245 true Scaffold10188: 5139-8383 Capsella grandiflora
Cagra.10188s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold10188: 7884-8383 Capsella grandiflora
Cagra.10188s0001 0.5kb downstream 0.5kb downstream 3245 true Scaffold10188: 4639-7883 Capsella grandiflora
Cagra.10188s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10188: 4639-5138 Capsella grandiflora
Cagra.10188s0001 1.0kb upstream 1.0kb upstream 3745 true Scaffold10188: 5139-8883 Capsella grandiflora
Cagra.10188s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold10188: 7884-8883 Capsella grandiflora
Cagra.10188s0001 1.0kb downstream 1.0kb downstream 3745 true Scaffold10188: 4139-7883 Capsella grandiflora
Cagra.10188s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10188: 4139-5138 Capsella grandiflora
Cagra.10188s0001 2.0kb upstream 2.0kb upstream 4745 true Scaffold10188: 5139-9883 Capsella grandiflora
Cagra.10188s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold10188: 7884-9883 Capsella grandiflora
Cagra.10188s0001 2.0kb downstream 2.0kb downstream 4745 true Scaffold10188: 3139-7883 Capsella grandiflora
Cagra.10188s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10188: 3139-5138 Capsella grandiflora
Cagra.10188s0001 5.0kb upstream 5.0kb upstream 6464 true Scaffold10188: 5139-11602 Capsella grandiflora
Cagra.10188s0001 5.0kb upstream 5.0kb upstream 3719 false Scaffold10188: 7884-11602 Capsella grandiflora
Cagra.10188s0001 5.0kb downstream 5.0kb downstream 7745 true Scaffold10188: 139-7883 Capsella grandiflora
Cagra.10188s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10188: 139-5138 Capsella grandiflora
Cagra.10188s0001 10.0kb upstream 10.0kb upstream 6464 true Scaffold10188: 5139-11602 Capsella grandiflora
Cagra.10188s0001 10.0kb upstream 10.0kb upstream 3719 false Scaffold10188: 7884-11602 Capsella grandiflora
Cagra.10188s0001 10.0kb downstream 10.0kb downstream 7883 true Scaffold10188: 1-7883 Capsella grandiflora
Cagra.10188s0001 10.0kb downstream 10.0kb downstream 5138 false Scaffold10188: 1-5138 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372202 5261 Brassicaceae View MSA
123833959 5264 Brassicales-Malvales View MSA
124340923 5266 SBM View MSA
124237879 5268 Malvidae View MSA
124061530 5270 Rosid View MSA
123741128 5271 Pentapetalae View MSA
122794491 5272 Eudicot View MSA
122048881 5273 Angiosperm View MSA
121311151 5274 Embryophyte View MSA
123348487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain