Gene : Cagra.10198s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22765:SF58 - VACUOLAR-SORTING RECEPTOR 1-RELATED Genomic Order:  5
Name:  ? Cagra.10198s0005 Secondary Identifier:  ? PAC:28908016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10198s0005 0.5kb upstream 0.5kb upstream 3362 true Scaffold10198: 13933-17294 Capsella grandiflora
Cagra.10198s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold10198: 16795-17294 Capsella grandiflora
Cagra.10198s0005 0.5kb downstream 0.5kb downstream 3362 true Scaffold10198: 13433-16794 Capsella grandiflora
Cagra.10198s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold10198: 13433-13932 Capsella grandiflora
Cagra.10198s0005 1.0kb upstream 1.0kb upstream 3862 true Scaffold10198: 13933-17794 Capsella grandiflora
Cagra.10198s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold10198: 16795-17794 Capsella grandiflora
Cagra.10198s0005 1.0kb downstream 1.0kb downstream 3862 true Scaffold10198: 12933-16794 Capsella grandiflora
Cagra.10198s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold10198: 12933-13932 Capsella grandiflora
Cagra.10198s0005 2.0kb upstream 2.0kb upstream 4862 true Scaffold10198: 13933-18794 Capsella grandiflora
Cagra.10198s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold10198: 16795-18794 Capsella grandiflora
Cagra.10198s0005 2.0kb downstream 2.0kb downstream 4862 true Scaffold10198: 11933-16794 Capsella grandiflora
Cagra.10198s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold10198: 11933-13932 Capsella grandiflora
Cagra.10198s0005 5.0kb upstream 5.0kb upstream 7862 true Scaffold10198: 13933-21794 Capsella grandiflora
Cagra.10198s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold10198: 16795-21794 Capsella grandiflora
Cagra.10198s0005 5.0kb downstream 5.0kb downstream 7862 true Scaffold10198: 8933-16794 Capsella grandiflora
Cagra.10198s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold10198: 8933-13932 Capsella grandiflora
Cagra.10198s0005 10.0kb upstream 10.0kb upstream 12862 true Scaffold10198: 13933-26794 Capsella grandiflora
Cagra.10198s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold10198: 16795-26794 Capsella grandiflora
Cagra.10198s0005 10.0kb downstream 10.0kb downstream 12862 true Scaffold10198: 3933-16794 Capsella grandiflora
Cagra.10198s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold10198: 3933-13932 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372160 5261 Brassicaceae View MSA
123839164 5264 Brassicales-Malvales View MSA
124337452 5266 SBM View MSA
124239703 5268 Malvidae View MSA
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain