Gene : Cagra.10277s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33431:SF2 - GB Genomic Order:  1
Name:  ? Cagra.10277s0001 Secondary Identifier:  ? PAC:28894470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10277s0001 0.5kb upstream 0.5kb upstream 1858 true Scaffold10277: 6348-8205 Capsella grandiflora
Cagra.10277s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold10277: 6348-6847 Capsella grandiflora
Cagra.10277s0001 0.5kb downstream 0.5kb downstream 1858 true Scaffold10277: 6848-8705 Capsella grandiflora
Cagra.10277s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10277: 8206-8705 Capsella grandiflora
Cagra.10277s0001 1.0kb upstream 1.0kb upstream 2358 true Scaffold10277: 5848-8205 Capsella grandiflora
Cagra.10277s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold10277: 5848-6847 Capsella grandiflora
Cagra.10277s0001 1.0kb downstream 1.0kb downstream 2358 true Scaffold10277: 6848-9205 Capsella grandiflora
Cagra.10277s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10277: 8206-9205 Capsella grandiflora
Cagra.10277s0001 2.0kb upstream 2.0kb upstream 3358 true Scaffold10277: 4848-8205 Capsella grandiflora
Cagra.10277s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold10277: 4848-6847 Capsella grandiflora
Cagra.10277s0001 2.0kb downstream 2.0kb downstream 3358 true Scaffold10277: 6848-10205 Capsella grandiflora
Cagra.10277s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10277: 8206-10205 Capsella grandiflora
Cagra.10277s0001 5.0kb upstream 5.0kb upstream 6358 true Scaffold10277: 1848-8205 Capsella grandiflora
Cagra.10277s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold10277: 1848-6847 Capsella grandiflora
Cagra.10277s0001 5.0kb downstream 5.0kb downstream 6358 true Scaffold10277: 6848-13205 Capsella grandiflora
Cagra.10277s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10277: 8206-13205 Capsella grandiflora
Cagra.10277s0001 10.0kb upstream 10.0kb upstream 8205 true Scaffold10277: 1-8205 Capsella grandiflora
Cagra.10277s0001 10.0kb upstream 10.0kb upstream 6847 false Scaffold10277: 1-6847 Capsella grandiflora
Cagra.10277s0001 10.0kb downstream 10.0kb downstream 11358 true Scaffold10277: 6848-18205 Capsella grandiflora
Cagra.10277s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold10277: 8206-18205 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377522 5261 Brassicaceae View MSA
123801553 5264 Brassicales-Malvales View MSA
124298842 5266 SBM View MSA
124245597 5268 Malvidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain