Gene : Cagra.10304s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10192 - MOLYBDOPTERIN BIOSYNTHESIS PROTEIN Genomic Order:  11
Name:  ? Cagra.10304s0011 Secondary Identifier:  ? PAC:28903341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6823 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10304s0011 0.5kb upstream 0.5kb upstream 5261 true Scaffold10304: 35561-40821 Capsella grandiflora
Cagra.10304s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold10304: 35561-36060 Capsella grandiflora
Cagra.10304s0011 0.5kb downstream 0.5kb downstream 5261 true Scaffold10304: 36061-41321 Capsella grandiflora
Cagra.10304s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold10304: 40822-41321 Capsella grandiflora
Cagra.10304s0011 1.0kb upstream 1.0kb upstream 5761 true Scaffold10304: 35061-40821 Capsella grandiflora
Cagra.10304s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold10304: 35061-36060 Capsella grandiflora
Cagra.10304s0011 1.0kb downstream 1.0kb downstream 5761 true Scaffold10304: 36061-41821 Capsella grandiflora
Cagra.10304s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold10304: 40822-41821 Capsella grandiflora
Cagra.10304s0011 2.0kb upstream 2.0kb upstream 6761 true Scaffold10304: 34061-40821 Capsella grandiflora
Cagra.10304s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold10304: 34061-36060 Capsella grandiflora
Cagra.10304s0011 2.0kb downstream 2.0kb downstream 6761 true Scaffold10304: 36061-42821 Capsella grandiflora
Cagra.10304s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold10304: 40822-42821 Capsella grandiflora
Cagra.10304s0011 5.0kb upstream 5.0kb upstream 9761 true Scaffold10304: 31061-40821 Capsella grandiflora
Cagra.10304s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold10304: 31061-36060 Capsella grandiflora
Cagra.10304s0011 5.0kb downstream 5.0kb downstream 9761 true Scaffold10304: 36061-45821 Capsella grandiflora
Cagra.10304s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold10304: 40822-45821 Capsella grandiflora
Cagra.10304s0011 10.0kb upstream 10.0kb upstream 14761 true Scaffold10304: 26061-40821 Capsella grandiflora
Cagra.10304s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold10304: 26061-36060 Capsella grandiflora
Cagra.10304s0011 10.0kb downstream 10.0kb downstream 14761 true Scaffold10304: 36061-50821 Capsella grandiflora
Cagra.10304s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold10304: 40822-50821 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374177 5261 Brassicaceae View MSA
123827724 5264 Brassicales-Malvales View MSA
124336688 5266 SBM View MSA
124238401 5268 Malvidae View MSA
124064569 5270 Rosid View MSA
123736843 5271 Pentapetalae View MSA
122786298 5272 Eudicot View MSA
122044086 5273 Angiosperm View MSA
121347061 5274 Embryophyte View MSA
123428395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain