Gene : Cagra.10304s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11527:SF156 - HEAT SHOCK FAMILY PROTEIN Genomic Order:  13
Name:  ? Cagra.10304s0013 Secondary Identifier:  ? PAC:28903340
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10304s0013 0.5kb upstream 0.5kb upstream 1557 true Scaffold10304: 45397-46953 Capsella grandiflora
Cagra.10304s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold10304: 46454-46953 Capsella grandiflora
Cagra.10304s0013 0.5kb downstream 0.5kb downstream 1557 true Scaffold10304: 44897-46453 Capsella grandiflora
Cagra.10304s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold10304: 44897-45396 Capsella grandiflora
Cagra.10304s0013 1.0kb upstream 1.0kb upstream 2057 true Scaffold10304: 45397-47453 Capsella grandiflora
Cagra.10304s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold10304: 46454-47453 Capsella grandiflora
Cagra.10304s0013 1.0kb downstream 1.0kb downstream 2057 true Scaffold10304: 44397-46453 Capsella grandiflora
Cagra.10304s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold10304: 44397-45396 Capsella grandiflora
Cagra.10304s0013 2.0kb upstream 2.0kb upstream 3057 true Scaffold10304: 45397-48453 Capsella grandiflora
Cagra.10304s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold10304: 46454-48453 Capsella grandiflora
Cagra.10304s0013 2.0kb downstream 2.0kb downstream 3057 true Scaffold10304: 43397-46453 Capsella grandiflora
Cagra.10304s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold10304: 43397-45396 Capsella grandiflora
Cagra.10304s0013 5.0kb upstream 5.0kb upstream 6057 true Scaffold10304: 45397-51453 Capsella grandiflora
Cagra.10304s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold10304: 46454-51453 Capsella grandiflora
Cagra.10304s0013 5.0kb downstream 5.0kb downstream 6057 true Scaffold10304: 40397-46453 Capsella grandiflora
Cagra.10304s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold10304: 40397-45396 Capsella grandiflora
Cagra.10304s0013 10.0kb upstream 10.0kb upstream 11057 true Scaffold10304: 45397-56453 Capsella grandiflora
Cagra.10304s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold10304: 46454-56453 Capsella grandiflora
Cagra.10304s0013 10.0kb downstream 10.0kb downstream 11057 true Scaffold10304: 35397-46453 Capsella grandiflora
Cagra.10304s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold10304: 35397-45396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377168 5261 Brassicaceae View MSA
123835104 5264 Brassicales-Malvales View MSA
124349586 5266 SBM View MSA
124247177 5268 Malvidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain