Gene : Cagra.10304s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31707:SF19 - PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED Genomic Order:  27
Name:  ? Cagra.10304s0027 Secondary Identifier:  ? PAC:28903343
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10304s0027 0.5kb upstream 0.5kb upstream 2493 true Scaffold10304: 93671-96163 Capsella grandiflora
Cagra.10304s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold10304: 93671-94170 Capsella grandiflora
Cagra.10304s0027 0.5kb downstream 0.5kb downstream 2493 true Scaffold10304: 94171-96663 Capsella grandiflora
Cagra.10304s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold10304: 96164-96663 Capsella grandiflora
Cagra.10304s0027 1.0kb upstream 1.0kb upstream 2993 true Scaffold10304: 93171-96163 Capsella grandiflora
Cagra.10304s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold10304: 93171-94170 Capsella grandiflora
Cagra.10304s0027 1.0kb downstream 1.0kb downstream 2993 true Scaffold10304: 94171-97163 Capsella grandiflora
Cagra.10304s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold10304: 96164-97163 Capsella grandiflora
Cagra.10304s0027 2.0kb upstream 2.0kb upstream 3993 true Scaffold10304: 92171-96163 Capsella grandiflora
Cagra.10304s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold10304: 92171-94170 Capsella grandiflora
Cagra.10304s0027 2.0kb downstream 2.0kb downstream 3993 true Scaffold10304: 94171-98163 Capsella grandiflora
Cagra.10304s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold10304: 96164-98163 Capsella grandiflora
Cagra.10304s0027 5.0kb upstream 5.0kb upstream 6993 true Scaffold10304: 89171-96163 Capsella grandiflora
Cagra.10304s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold10304: 89171-94170 Capsella grandiflora
Cagra.10304s0027 5.0kb downstream 5.0kb downstream 6921 true Scaffold10304: 94171-101091 Capsella grandiflora
Cagra.10304s0027 5.0kb downstream 5.0kb downstream 4928 false Scaffold10304: 96164-101091 Capsella grandiflora
Cagra.10304s0027 10.0kb upstream 10.0kb upstream 11993 true Scaffold10304: 84171-96163 Capsella grandiflora
Cagra.10304s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold10304: 84171-94170 Capsella grandiflora
Cagra.10304s0027 10.0kb downstream 10.0kb downstream 6921 true Scaffold10304: 94171-101091 Capsella grandiflora
Cagra.10304s0027 10.0kb downstream 10.0kb downstream 4928 false Scaffold10304: 96164-101091 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041117 5273 Angiosperm View MSA
122378785 5261 Brassicaceae View MSA
123828597 5264 Brassicales-Malvales View MSA
124343715 5266 SBM View MSA
124243570 5268 Malvidae View MSA
124066033 5270 Rosid View MSA
123738499 5271 Pentapetalae View MSA
122787006 5272 Eudicot View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain