Gene : Cagra.9677s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32370:SF4 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 Genomic Order:  1
Name:  ? Cagra.9677s0001 Secondary Identifier:  ? PAC:28905245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9677s0001 0.5kb upstream 0.5kb upstream 2476 true Scaffold9677: 1578-4053 Capsella grandiflora
Cagra.9677s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9677: 1578-2077 Capsella grandiflora
Cagra.9677s0001 0.5kb downstream 0.5kb downstream 2476 true Scaffold9677: 2078-4553 Capsella grandiflora
Cagra.9677s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9677: 4054-4553 Capsella grandiflora
Cagra.9677s0001 1.0kb upstream 1.0kb upstream 2976 true Scaffold9677: 1078-4053 Capsella grandiflora
Cagra.9677s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9677: 1078-2077 Capsella grandiflora
Cagra.9677s0001 1.0kb downstream 1.0kb downstream 2976 true Scaffold9677: 2078-5053 Capsella grandiflora
Cagra.9677s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9677: 4054-5053 Capsella grandiflora
Cagra.9677s0001 2.0kb upstream 2.0kb upstream 3976 true Scaffold9677: 78-4053 Capsella grandiflora
Cagra.9677s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9677: 78-2077 Capsella grandiflora
Cagra.9677s0001 2.0kb downstream 2.0kb downstream 3976 true Scaffold9677: 2078-6053 Capsella grandiflora
Cagra.9677s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9677: 4054-6053 Capsella grandiflora
Cagra.9677s0001 5.0kb upstream 5.0kb upstream 4053 true Scaffold9677: 1-4053 Capsella grandiflora
Cagra.9677s0001 5.0kb upstream 5.0kb upstream 2077 false Scaffold9677: 1-2077 Capsella grandiflora
Cagra.9677s0001 5.0kb downstream 5.0kb downstream 5577 true Scaffold9677: 2078-7654 Capsella grandiflora
Cagra.9677s0001 5.0kb downstream 5.0kb downstream 3601 false Scaffold9677: 4054-7654 Capsella grandiflora
Cagra.9677s0001 10.0kb upstream 10.0kb upstream 4053 true Scaffold9677: 1-4053 Capsella grandiflora
Cagra.9677s0001 10.0kb upstream 10.0kb upstream 2077 false Scaffold9677: 1-2077 Capsella grandiflora
Cagra.9677s0001 10.0kb downstream 10.0kb downstream 5577 true Scaffold9677: 2078-7654 Capsella grandiflora
Cagra.9677s0001 10.0kb downstream 10.0kb downstream 3601 false Scaffold9677: 4054-7654 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373974 5261 Brassicaceae View MSA
123827592 5264 Brassicales-Malvales View MSA
124342059 5266 SBM View MSA
124243534 5268 Malvidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain