Gene : Cagra.9655s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11075:SF6 - CLASS I PEPTIDE CHAIN RELEASE FACTOR Genomic Order:  3
Name:  ? Cagra.9655s0003 Secondary Identifier:  ? PAC:28902966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9655s0003 0.5kb upstream 0.5kb upstream 1527 true Scaffold9655: 6430-7956 Capsella grandiflora
Cagra.9655s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9655: 7457-7956 Capsella grandiflora
Cagra.9655s0003 0.5kb downstream 0.5kb downstream 1527 true Scaffold9655: 5930-7456 Capsella grandiflora
Cagra.9655s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9655: 5930-6429 Capsella grandiflora
Cagra.9655s0003 1.0kb upstream 1.0kb upstream 2027 true Scaffold9655: 6430-8456 Capsella grandiflora
Cagra.9655s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9655: 7457-8456 Capsella grandiflora
Cagra.9655s0003 1.0kb downstream 1.0kb downstream 2027 true Scaffold9655: 5430-7456 Capsella grandiflora
Cagra.9655s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9655: 5430-6429 Capsella grandiflora
Cagra.9655s0003 2.0kb upstream 2.0kb upstream 3027 true Scaffold9655: 6430-9456 Capsella grandiflora
Cagra.9655s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9655: 7457-9456 Capsella grandiflora
Cagra.9655s0003 2.0kb downstream 2.0kb downstream 3027 true Scaffold9655: 4430-7456 Capsella grandiflora
Cagra.9655s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9655: 4430-6429 Capsella grandiflora
Cagra.9655s0003 5.0kb upstream 5.0kb upstream 5486 true Scaffold9655: 6430-11915 Capsella grandiflora
Cagra.9655s0003 5.0kb upstream 5.0kb upstream 4459 false Scaffold9655: 7457-11915 Capsella grandiflora
Cagra.9655s0003 5.0kb downstream 5.0kb downstream 6027 true Scaffold9655: 1430-7456 Capsella grandiflora
Cagra.9655s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9655: 1430-6429 Capsella grandiflora
Cagra.9655s0003 10.0kb upstream 10.0kb upstream 5486 true Scaffold9655: 6430-11915 Capsella grandiflora
Cagra.9655s0003 10.0kb upstream 10.0kb upstream 4459 false Scaffold9655: 7457-11915 Capsella grandiflora
Cagra.9655s0003 10.0kb downstream 10.0kb downstream 7456 true Scaffold9655: 1-7456 Capsella grandiflora
Cagra.9655s0003 10.0kb downstream 10.0kb downstream 6429 false Scaffold9655: 1-6429 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334535 5261 Brassicaceae Singleton cluster - no MSA
123775357 5264 Brassicales-Malvales Singleton cluster - no MSA
124273767 5266 SBM Singleton cluster - no MSA
124129322 5268 Malvidae Singleton cluster - no MSA
124051473 5270 Rosid View MSA
123749031 5271 Pentapetalae View MSA
122791384 5272 Eudicot View MSA
122043845 5273 Angiosperm View MSA
121345012 5274 Embryophyte View MSA
123428713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain