Gene : Cagra.9730s0002 C. grandiflora v1.1
Defline:  (1 of 10) PTHR31470:SF13 - CYSTEINE PROTEINASE-LIKE PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.9730s0002 Secondary Identifier:  ? PAC:28902443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9730s0002 0.5kb upstream 0.5kb upstream 3455 true Scaffold9730: 4223-7677 Capsella grandiflora
Cagra.9730s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9730: 7178-7677 Capsella grandiflora
Cagra.9730s0002 0.5kb downstream 0.5kb downstream 3455 true Scaffold9730: 3723-7177 Capsella grandiflora
Cagra.9730s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9730: 3723-4222 Capsella grandiflora
Cagra.9730s0002 1.0kb upstream 1.0kb upstream 3955 true Scaffold9730: 4223-8177 Capsella grandiflora
Cagra.9730s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9730: 7178-8177 Capsella grandiflora
Cagra.9730s0002 1.0kb downstream 1.0kb downstream 3955 true Scaffold9730: 3223-7177 Capsella grandiflora
Cagra.9730s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9730: 3223-4222 Capsella grandiflora
Cagra.9730s0002 2.0kb upstream 2.0kb upstream 4613 true Scaffold9730: 4223-8835 Capsella grandiflora
Cagra.9730s0002 2.0kb upstream 2.0kb upstream 1658 false Scaffold9730: 7178-8835 Capsella grandiflora
Cagra.9730s0002 2.0kb downstream 2.0kb downstream 4955 true Scaffold9730: 2223-7177 Capsella grandiflora
Cagra.9730s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9730: 2223-4222 Capsella grandiflora
Cagra.9730s0002 5.0kb upstream 5.0kb upstream 4613 true Scaffold9730: 4223-8835 Capsella grandiflora
Cagra.9730s0002 5.0kb upstream 5.0kb upstream 1658 false Scaffold9730: 7178-8835 Capsella grandiflora
Cagra.9730s0002 5.0kb downstream 5.0kb downstream 7177 true Scaffold9730: 1-7177 Capsella grandiflora
Cagra.9730s0002 5.0kb downstream 5.0kb downstream 4222 false Scaffold9730: 1-4222 Capsella grandiflora
Cagra.9730s0002 10.0kb upstream 10.0kb upstream 4613 true Scaffold9730: 4223-8835 Capsella grandiflora
Cagra.9730s0002 10.0kb upstream 10.0kb upstream 1658 false Scaffold9730: 7178-8835 Capsella grandiflora
Cagra.9730s0002 10.0kb downstream 10.0kb downstream 7177 true Scaffold9730: 1-7177 Capsella grandiflora
Cagra.9730s0002 10.0kb downstream 10.0kb downstream 4222 false Scaffold9730: 1-4222 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512491 5273 Angiosperm View MSA
122382081 5261 Brassicaceae View MSA
123803651 5264 Brassicales-Malvales View MSA
124300740 5266 SBM View MSA
124151853 5268 Malvidae View MSA
123877195 5270 Rosid View MSA
123460756 5271 Pentapetalae View MSA
122496119 5272 Eudicot View MSA
120785511 5274 Embryophyte View MSA
122827377 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain